Transcript Information: R_Transcript_68854.p1


Annotated TAIR IDAT5G01160.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:54280-55727 | Forward length=360
E-Value2.8E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0050792844891
Replicate 27.1442988184001
Replicate 37.0149177515628
Condition 2: 8 Hour
Replicate 17.9613776388018
Replicate 27.8199681297152
Replicate 38.990022651307
Condition 3: 24 Hour
Replicate 19.1136852888806
Replicate 28.0883180052401
Replicate 39.6818958350359


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68854.p1 GENE.R_Transcript_68854~~R_Transcript_68854.p1 ORF type:5prime_partial len:529 (+),score=102.90 R_Transcript_68854:2-1588(+)
TCCAGTGACTACCCCACCCCCAGGGGCTACTCCCCCCCCCATGGCCACCCCCCCCCCCCCAGCCACCCCCGCCCCCCCCCCCCGCCACCCACCCCACCCCCCACCTTCTCCCCCCCCCCCCCCCCCAAACCCACCCCACACCCCCAAAATCCAAATTGTCCCCAGAAAACCCCCCAAATTCTCGAAAACACTTTTAACACAACCAGAGAGCAAGAACACACCCAGGAGAGATATAGCGACAGAAGAGAGAAGAATCAGAAGATGCTTCAAATAAGGCTGAACAAGGGATCATCCCTTGACGGAGGGTCAGGGCCAAAGTCATTGCAAACAGAGACAGTAACAGTAGCATGCCCTGATCACCTTGTTCTTGCCGACCTTCCTGTGGCTAAGGGTCTGGGCTCCGCTACTTCTGCTTCTCTAGTCAAGATTGTGGGCCGTAGATCCAGGCGACAACTTGGTGAAAGGGTCCACTTTTGTGTCCGTTGTGATTTCCCTATTGCCATCTATGGCCGCCTGAGTCCTTGTGAGCACGCCTTCTGTCTTGATTGTGCTAGGAGTGACTCAATATGCTATCTATGTGATGAAAGGATCCAGAAGATTCAAACAATCAAACTGATGGAGGGGATTCTCATTTGTGCTGCTCCTCACTGCCTCAAGTCTTCTATGAAAAAGTCAGAATTTGAGTCCCATATTCATGATAGCCATGCCGACTTGCTTCAACCTAATATGAAGAAGGATGAAATGAATGAACCAGAGGCATCAGGCACGAAGCAGTCTTCAACTATGGATACAACTCTCCGGGGTCCGCCAAGACCGGGGTTCCCTTCTAATTCAAATTCTCAAATGAATGATCGTGATGATAAAGCTCGTCGCCATCAGCTGAGAGAGCAACCTCCTCCAAGATCAGTTGTGCAGCCAAAGCCACCCCAGTATCATGGGCAAGCTCATTCTTCTGAGCTCCAAACTGACAGCCGACCCATGGCCATTGATGACTCCGTCCAATCTCGGATGCAACAACAAACTCTTGATACACAGGGTGGAATGCAGCAGGATTTAAGTCAATTCTCTGAGAAGCAGCAGCAAGGGATTCTCCCTGATCCTCATCGTGACTACCCGTACGCTCAACAGCATCCGAATTTTCCAATGTCTGTCAACTCAAATCATGTGCTGCTGGGCCCACCTCCATTTGGCTTTCCACCTTTTTCATCCAACGGAGGTCCTCCGTTCTATGGTGCTCCCATTCCCTTTGAGATGGCACGTTCAGACACAGCAGCAGAAGCCGGGTCAGAGCAAGGATCTGTACTGGGTTTTGCACCTGGACCAGGTGGGGCCGTCAATTTCCCCGACGGTTATCCTCGTCCCTGGAGTGGGGGTCCCGGAAATGTTCCATTTGACGCTATTCAGGGCAGTCAGGGTTTATTGGCAGCACCGCAAGGCATGCCAGCTCCACCACCTCCACCTGGACCACCTCCCCCTCACATATTGCAGCATAAACAAGGTTACTATTCCGGTGATATGAGTAATGATGCAAAGAACTATGGATGGCAGTCAGATAGACGTGACGGGTTTGGAAGTGGCCAGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68854.p1 GENE.R_Transcript_68854~~R_Transcript_68854.p1 ORF type:5prime_partial len:529 (+),score=102.90 R_Transcript_68854:2-1588(+)
SSDYPTPRGYSPPHGHPPPPSHPRPPPPPPTPPPTFSPPPPPKPTPHPQNPNCPQKTPQILENTFNTTREQEHTQERYSDRREKNQKMLQIRLNKGSSLDGGSGPKSLQTETVTVACPDHLVLADLPVAKGLGSATSASLVKIVGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKLMEGILICAAPHCLKSSMKKSEFESHIHDSHADLLQPNMKKDEMNEPEASGTKQSSTMDTTLRGPPRPGFPSNSNSQMNDRDDKARRHQLREQPPPRSVVQPKPPQYHGQAHSSELQTDSRPMAIDDSVQSRMQQQTLDTQGGMQQDLSQFSEKQQQGILPDPHRDYPYAQQHPNFPMSVNSNHVLLGPPPFGFPPFSSNGGPPFYGAPIPFEMARSDTAAEAGSEQGSVLGFAPGPGGAVNFPDGYPRPWSGGPGNVPFDAIQGSQGLLAAPQGMPAPPPPPGPPPPHILQHKQGYYSGDMSNDAKNYGWQSDRRDGFGSGQD*

Click here to download the sequence:
Link to NCBI Protein BLAST