Transcript Information: R_Transcript_68963.p1


Annotated TAIR IDAT5G19420.2
Annotated Gene NameRegulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6547945-6552981 | Reverse length=1139
E-Value1.5E-307
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5531281502425
Replicate 20.65750418840182
Replicate 31.817235967962
Condition 2: 8 Hour
Replicate 11.5846801949157
Replicate 21.3071079155599
Replicate 33.2589530550173
Condition 3: 24 Hour
Replicate 12.4443594334299
Replicate 22.4403522363269
Replicate 32.3304236723001


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68963.p1 GENE.R_Transcript_68963~~R_Transcript_68963.p1 ORF type:internal len:479 (+),score=103.89,RCC1|PF00415.14|0.039,RCC1|PF00415.14|2.4e-11,RCC1|PF00415.14|5.4e-10,RCC1|PF00415.14|1.7e-12,RCC1|PF00415.14|4.8e-14,RCC1|PF00415.14|1.6,RCC1_2|PF13540.2|4.8e+03,RCC1_2|PF13540.2|2.4e+03,RCC1_2|PF13540.2|0.00051,RCC1_2|PF13540.2|7.7e-07,RCC1_2|PF13540.2|0.0024,RCC1_2|PF13540.2|16,RCC1_2|PF13540.2|0.00021 R_Transcript_68963:2-1435(+)
TATCCTCGTCCAGAGAAGGAATACCAGTCATTTTCGCTCATATATAATGATAGATCATTGGATTTGATTTGCAAAGATAAAGATGAAGCCGAGGTATGGTTTAGTGGTCTCAAAGCCTTAATCTCAAGGAGCCATCAAAGGAAATGGAGAACAGAATCAAGGAGTGATGGAATTCCATCTGAAGCAAATAGTCCACGAACATATACCCGAAGAAGCTCCCCTTTACACTCTCCCTTTGCCAGTGGGGATGGCTTGCCAAAGGATGGCAGCGATCACCTTCGCCTCCATACTCCATATGACAGTCCCCCGAAGAATGGTTTGGATAAGGCATTTTCAGATGTGATGTTTGCTGTTCCTCCAAAGGGGTTTTTCCCCTCGGATTCTGCTGGATCTGTCCATTCCTTGTCATCAGGGTCTGATAGTGTATATAGTCACATGAAGGGAATGGGTGCAGATACTTTTAGAATGAGTTTATCAAGTGCTGTAAGCTCATCAAGTCAGGGTTCTGGTCATGATGATGGGGATGCCCTGGGTGATGTTTTCATCTGGGGAGAAACTACAGGAGATGGCATTTTGGGTGGTGGACTGCATAGAGTAGGGAGCCGTTATGGTGTCCGGATGGATTGTCTTTTGCCCAAGGCCTTAGAGTCTGCTGTGGTCCTTGATGTTCAGAACATAGCTTGTGGTGGACGTCATGCAGCTTTGGTTACTAAACAAGGGGAGATTTTTTCTTGGGGTGAGGAATCTGGCGGTAGGCTAGGGCATGGGGTTGATGCTGATGTGTCACATCCAAAGCTTATAGATGCCCTCAGCAATACTAACATTGAGCTTGTAGCATGTGGTGAGCATCATACTTGTGCTGTTACCCTTTCTGGTGAGCTATATACATGGGGTGATGGTGCTTTCAATTTTGGTCTTCTTGGGCATGGAAATGATGCGAGTCATTGGGTTCCAAAGAGAGTGAATGGTCCATTGGAGGGTATACATGTTTCATACATCTCCTGCGGACCCTGGCATACAGCTGTTGTCACCTCTGCTGGCCAGTTGTTTACTTTTGGTGACGGTACATTTGGTGTTTTAGGCCATGGAGACCGCAGAAGTGTTTCCGTGCCACGAGAAGTGGAGTCCCTCAAGGGTCTCCGCACAGTTCGAGCTGCTTGTGGTGTCTGGCATACTGCTGCAGTCATCGAAGTTATGGTTGGGAATTCAGGGTCAAGCAACTGCTCTTCAGGTAAGCTGTTCACATGGGGAGATGGAGATAAAGGTCGACTTGGGCATGGTGACAAGGACTCAAAACTGGTTCCTACATGTGTTGCAGCTCTTGTCGAGCCTAACTTTTGTCAGGTTGCCTGTGGACACAGCATCACAGTCGCGCTTACAACTTCTGGTCATGTTTATACTATGGGCAGCCCTGTTTATGGTCAACTAGGTAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68963.p1 GENE.R_Transcript_68963~~R_Transcript_68963.p1 ORF type:internal len:479 (+),score=103.89,RCC1|PF00415.14|0.039,RCC1|PF00415.14|2.4e-11,RCC1|PF00415.14|5.4e-10,RCC1|PF00415.14|1.7e-12,RCC1|PF00415.14|4.8e-14,RCC1|PF00415.14|1.6,RCC1_2|PF13540.2|4.8e+03,RCC1_2|PF13540.2|2.4e+03,RCC1_2|PF13540.2|0.00051,RCC1_2|PF13540.2|7.7e-07,RCC1_2|PF13540.2|0.0024,RCC1_2|PF13540.2|16,RCC1_2|PF13540.2|0.00021 R_Transcript_68963:2-1435(+)
YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHQRKWRTESRSDGIPSEANSPRTYTRRSSPLHSPFASGDGLPKDGSDHLRLHTPYDSPPKNGLDKAFSDVMFAVPPKGFFPSDSAGSVHSLSSGSDSVYSHMKGMGADTFRMSLSSAVSSSSQGSGHDDGDALGDVFIWGETTGDGILGGGLHRVGSRYGVRMDCLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDADVSHPKLIDALSNTNIELVACGEHHTCAVTLSGELYTWGDGAFNFGLLGHGNDASHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRRSVSVPREVESLKGLRTVRAACGVWHTAAVIEVMVGNSGSSNCSSGKLFTWGDGDKGRLGHGDKDSKLVPTCVAALVEPNFCQVACGHSITVALTTSGHVYTMGSPVYGQLGN

Click here to download the sequence:
Link to NCBI Protein BLAST