Transcript Information: R_Transcript_68988.p1


Annotated TAIR IDAT5G41370.1
Annotated Gene NameHomolog of xeroderma pigmentosum complementation group B 1
Annotated Gene Symbol(s)XPB1, ATXPB1
Annotation TypeOrtholog
Chromosome Positionchr5:16551337-16555792 | Forward length=767
E-Value5.8E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.779290467775
Replicate 228.231512046239
Replicate 335.288757918397
Condition 2: 8 Hour
Replicate 133.585341785748
Replicate 243.210893287696
Replicate 342.926106196861
Condition 3: 24 Hour
Replicate 142.502967435074
Replicate 232.784844296804
Replicate 331.796327754614


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_68988.p1 GENE.R_Transcript_68988~~R_Transcript_68988.p1 ORF type:complete len:148 (+),score=35.73,ERCC3_RAD25_C|PF16203.1|2.3e-27 R_Transcript_68988:3-446(+)
ATGGCTGGGGGAAAAGAGGAGTATAATGCCTTCTTTTATTCCCTTGTATCTACAGATACACAGGAGATGTATTACTCAACTAAAAGGCAACAATTCTTGATTGACCAAGGTTACAGCTTTAAGGTCATAACGAGTTTACCACCTCCTGATGAGTTACCTAATCTCAGCTACTACAAGCTTGACGAGCAGCTAGCTCTTCTTTCAAAGGTACTGAATGCTGGGGATGATGTCGTTGGTCTGGAGCAGTTGGAAGAAGATTCTGATGATATAACCCTCATGAAAGCTCGCCGTTCCATGGGATCAATGAGTGCCATGTCTGGTGCAAACGGGATGGTTTACATGGAGTACAACACTGGGCAGAAGAGACTTGGACCAGGACAGGTGAAGAGCAAGCCCAAAGATCCTTCCAAGCGCCACCACTTATTCAGAAAGCGGTTTGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_68988.p1 GENE.R_Transcript_68988~~R_Transcript_68988.p1 ORF type:complete len:148 (+),score=35.73,ERCC3_RAD25_C|PF16203.1|2.3e-27 R_Transcript_68988:3-446(+)
MAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDELPNLSYYKLDEQLALLSKVLNAGDDVVGLEQLEEDSDDITLMKARRSMGSMSAMSGANGMVYMEYNTGQKRLGPGQVKSKPKDPSKRHHLFRKRFV*

Click here to download the sequence:
Link to NCBI Protein BLAST