Transcript Information: R_Transcript_69149.p1


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value7.3E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.357609508557
Replicate 215.088866739848
Replicate 322.984387554105
Condition 2: 8 Hour
Replicate 120.335718346017
Replicate 212.052136314402
Replicate 38.3066692669567
Condition 3: 24 Hour
Replicate 19.2609459664298
Replicate 25.5325056200092
Replicate 36.0840399468664


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_69149.p1 GENE.R_Transcript_69149~~R_Transcript_69149.p1 ORF type:complete len:295 (+),score=84.22,Chloroa_b-bind|PF00504.17|5.9e-46 R_Transcript_69149:371-1255(+)
ATGGCCTCATTGGCAGCAACGACGGCGGCAGCTTGCCTAGGAAAGTCAGAGATGTTGGGAAACCCAATCAACTTGAGAAATGCCTCAACTGCCCCTAGTACTACAGCTGCTCCTAGCGTTGGTTCTTCAAAGATAGTTGCCCTTTTTGGTAAGAAGAAGGCAGCTGCTCCACCCCCAAAGGCTAAGCCAGCAGCTGTTGCCCCTGTTGATGAGGAGCTTGCTAAATGGTATGGCCCTGACCGTAGGATCTTCTTGCCCGAAGGCCTTTTGGACCGCTCCGAGATCCCTGAGTACCTCACCGGAGAAGTCCCCGGAGACTACGGTTATGATCCTTTTGGTCTGAGCAAGAAGCCAGAGAACTTGGCCAAGTACCGTGCATATGAGCTTATCCACGCCCGGTGGGCTATGCTTGGAGCAGCTGGGTTCATCATTCCAGAGGCTTTCAACAAATTCGGTGCTAACTGTGGCCCTGAAGCTGTTTGGTTCAAGACTGGTGCCCTGCTTTTGGATGGAAACACCCTTAACTACTTTGGGAAGAACATCCCCATCAATCTCATCGTCGCTGTCGTTGCTGAGGTTGTTCTTGTTGGTGGTGCTGAGTACTACAGAATCATCAATGGCTTGGATCTGGAGGACAAGCTTCACCCAGGAGGCCCATTTGACCCATTGGGCTTGGCAAAGGACCCAGACCAGGCAGCATTGTTGAAGGTGAAGGAAATCAAGAATGGCAGGCTAGCTATGTTTGCAATGTTGGGCTTCTTCCTCCAAGCCTATGTGACCGGTCAAGGCCCAGTTGAGAACCTAGCTGCTCACCTGAGCGACCCATTTGGCAACAACTTGCTCACTGTTATTGCTGGCTCTGCTGAAAGAGCTCCTACCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_69149.p1 GENE.R_Transcript_69149~~R_Transcript_69149.p1 ORF type:complete len:295 (+),score=84.22,Chloroa_b-bind|PF00504.17|5.9e-46 R_Transcript_69149:371-1255(+)
MASLAATTAAACLGKSEMLGNPINLRNASTAPSTTAAPSVGSSKIVALFGKKKAAAPPPKAKPAAVAPVDEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENLAKYRAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFFLQAYVTGQGPVENLAAHLSDPFGNNLLTVIAGSAERAPTL*

Click here to download the sequence:
Link to NCBI Protein BLAST