Transcript Information: R_Transcript_69150.p1


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value4.1E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5757445864842
Replicate 21.2670181285697
Replicate 33.8507015786636
Condition 2: 8 Hour
Replicate 11.583137819865
Replicate 20.38553244553768
Replicate 30.70415730854949
Condition 3: 24 Hour
Replicate 10.8906045907299
Replicate 20.57039462648045
Replicate 30.66040488279432


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_69150.p1 GENE.R_Transcript_69150~~R_Transcript_69150.p1 ORF type:complete len:232 (+),score=56.21,Chloroa_b-bind|PF00504.17|1.2e-24 R_Transcript_69150:104-799(+)
ATGGCTTCATTGGCGGCAACGACGGCGGCAGCTTGTCTAGGAAAGTCAGAGATATTGGGAAACCCACTCAACTTGAGAAATGCCTCAACTGCCCCTAGTACTACAGCTGCTCCTAGCGTTGGTTCTTCAAAGATAGTTGCCCTTTTTGGTAAGAAGAAGGCAGCTGCTCCACCCCCAAAGGCTAAGCCAGCAGCTGTTGCCCCTGTTGATGAGGAGCTTGCTAAATGGTATGGCCCTGACCGTAGGATCTTCTTGCCCGAAGGCCTTTTGGACCGCTCCGAGATCCCTGAGTACCTCACCGGAGAAGTCCCCGGAGACTACGGTTATGATCCTTTTGGTCTGAGCAAGAAGCCAGAGAACTTGGCCAAGTACCGTGCATATGAGCTTATCCACGCCCGGTGGGCTATGCTTGGAGCAGCTGGGTTCATCATTCCAGAGGCTTTCAACAAATTCGGTGCTAACTGTGGCCCTGAAGCTGTTTGGTTCAAGACTGGTGCCCTGCTTTTGGATGGAAACACCCTTAACTACTTTGGGAAGAACATCCCCATCAATCTCATCGTCGCTGTCGTTGCTGAGGTTGTTCTTGTTGGTGGTGCTGAGTACTACAGAATCATCAATGGCTTGGTATTGTGTCTGGTTCCCTTCTTGTCTTCATATCCTTTGATTTTGTGTTCCAAACTTTTCTTCTGCATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_69150.p1 GENE.R_Transcript_69150~~R_Transcript_69150.p1 ORF type:complete len:232 (+),score=56.21,Chloroa_b-bind|PF00504.17|1.2e-24 R_Transcript_69150:104-799(+)
MASLAATTAAACLGKSEILGNPLNLRNASTAPSTTAAPSVGSSKIVALFGKKKAAAPPPKAKPAAVAPVDEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPENLAKYRAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIVAVVAEVVLVGGAEYYRIINGLVLCLVPFLSSYPLILCSKLFFCI*

Click here to download the sequence:
Link to NCBI Protein BLAST