Transcript Information: R_Transcript_69212.p1


Annotated TAIR IDAT1G48100.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17766921-17769625 | Forward length=475
E-Value2.2E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.320748644435
Replicate 210.498150208149
Replicate 312.694150417868
Condition 2: 8 Hour
Replicate 17.3967717028137
Replicate 27.73313830341
Replicate 38.9245418883569
Condition 3: 24 Hour
Replicate 117.218355420778
Replicate 211.992547021751
Replicate 314.683001894127


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_69212.p1 GENE.R_Transcript_69212~~R_Transcript_69212.p1 ORF type:complete len:480 (+),score=58.30,Glyco_hydro_28|PF00295.13|6.8e-87,Pectate_lyase_3|PF12708.3|1.4e-08 R_Transcript_69212:325-1764(+)
ATGAGGCAATATTCTTACTTTGTTACACTAGTTTTATTAGTTTCAATTATTCTTGGTTCACAAAATGTTGGTAAATTAGTTGAAGGAAGAGCTCATTTCCACAAGAAAAAAGGGAGTTCCCCTGCTTATAGCCATGCTCCTAGAGGTGATGATCAAGACCAACAACCTTCATATAGCCCTGTTCCTTCCTCTCCCTCCACTGTCCCCTCCACCCCGTACCCGAGCCCGGCCCAGGATGGGCCCTGCATTTTCGACGTCACCACCTTTGGGGCCGTCGGAGATGGGACCACCGACGACACCCCAGCATTCAAGGCTGCCTGGAAGGCAGCCTGTGCGGTGGAATCCGGTGTCATAATGGTACCTTCCACAGGGAAGTTCATGATCACCTCTACCATATTTTCTGGGCCGTGTAAGCCTGGACTTGTGCTCCAGGTGGATGGAATCCTAATGCCACCGGACGGGCCGGAATGCTGGCCGGAATCAGACAGCAAGAACCAATGGCTAGTATTCTACAGGCTAGATGGAATGACACTAAACGGAACAGGAACAATTGAAGGCAATGGTCAGAAATGGTGGGAGCTTCCTTGTAAACCTCACAAGGGTCCACATGGATCAACATTGCCCGGCCCATGTGACAGCCCTGCGATGATTAGGTTCTTCATGAGCAATAACTTGAAAGTAAGTGGGGTAAGAATACAAAACAGTCCTCAATTTCACATGAAGTTTGATGGGTGTGAAGAGGTGTTGATAGAAAAATTACAAATCAATTCACCTCAATACAGCCCCAACACAGATGGCATTCATGTGGGGAATTCTAAGGGTGTTCGCATCTACAATTCTATGATTGCTAATGGAGATGATTGCATTTCAATAGGACCAGGTTCCTCAGATGTGGATATACAGGGGGTGGTGTGCGACCACAGTCACGGGATCAGCATTGGGAGTCTAGGAGTCCACAACACACAAGCATGTGTATCAAACATATCAGTCCGGGGCGCCTTCATAAAGAACTCAGACAATGGAGTGAGGATCAAGACATGGCAAGGTGGCTCGGGCTCAGTCTCAAACATACTATTTGAAGACATACAAATGGAGAACACAACCAACTGCATAATGATAGACCAGTATTACTGCCTCTCCAAGGCCTGCATGAACGAAACCTCGGCCGTGTACCTCTCAGGAGTGACCTACAGAAACATTAAGGGCACTTACAACAATGTAAGAAGTGCCCCTATTCACTTTGCTTGTAGTGACACTGTCCCTTGCACAAACATAACCATGTCAGAAGTTGAACTTTTGCCCTCTCAAGGAGTTCTTGTGGACAACCCCTTTTGTTGGAATACTTATGGTATTCAAGAGACCTTGACTATTCCTCCTATTGATTGCTTCCTTGATGGTATTCCTCAGTCTCTTGGTGAGGTTCTTTCTAGTTGTTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_69212.p1 GENE.R_Transcript_69212~~R_Transcript_69212.p1 ORF type:complete len:480 (+),score=58.30,Glyco_hydro_28|PF00295.13|6.8e-87,Pectate_lyase_3|PF12708.3|1.4e-08 R_Transcript_69212:325-1764(+)
MRQYSYFVTLVLLVSIILGSQNVGKLVEGRAHFHKKKGSSPAYSHAPRGDDQDQQPSYSPVPSSPSTVPSTPYPSPAQDGPCIFDVTTFGAVGDGTTDDTPAFKAAWKAACAVESGVIMVPSTGKFMITSTIFSGPCKPGLVLQVDGILMPPDGPECWPESDSKNQWLVFYRLDGMTLNGTGTIEGNGQKWWELPCKPHKGPHGSTLPGPCDSPAMIRFFMSNNLKVSGVRIQNSPQFHMKFDGCEEVLIEKLQINSPQYSPNTDGIHVGNSKGVRIYNSMIANGDDCISIGPGSSDVDIQGVVCDHSHGISIGSLGVHNTQACVSNISVRGAFIKNSDNGVRIKTWQGGSGSVSNILFEDIQMENTTNCIMIDQYYCLSKACMNETSAVYLSGVTYRNIKGTYNNVRSAPIHFACSDTVPCTNITMSEVELLPSQGVLVDNPFCWNTYGIQETLTIPPIDCFLDGIPQSLGEVLSSCS*

Click here to download the sequence:
Link to NCBI Protein BLAST