Transcript Information: R_Transcript_69353.p1


Annotated TAIR IDAT3G12130.1
Annotated Gene NameKH domain-containing protein / zinc finger (CCCH type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3864486-3866406 | Reverse length=248
E-Value5.9E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.339865488551
Replicate 261.401552076528
Replicate 367.303301184572
Condition 2: 8 Hour
Replicate 169.250401551831
Replicate 275.688895579271
Replicate 380.091642737378
Condition 3: 24 Hour
Replicate 1105.47968475409
Replicate 294.739084581518
Replicate 3107.10684355375


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_69353.p1 GENE.R_Transcript_69353~~R_Transcript_69353.p1 ORF type:complete len:291 (+),score=58.02,zf-CCCH|PF00642.20|2e-05,zf-CCCH|PF00642.20|3.6e-05,zf-CCCH|PF00642.20|2.5e-09,KH_1|PF00013.25|1e-12,Torus|PF16131.1|0.0023,Torus|PF16131.1|82,Torus|PF16131.1|0.00092,KH_3|PF13014.2|1.5e-07,zf-CCCH_2|PF14608.2|1.7,zf-CCCH_2|PF14608.2|0.013,zf-CCCH_2|PF14608.2|0.0034 R_Transcript_69353:304-1176(+)
ATGGCGGACTTTAGAAAGAGAGGCAGGCACGATGGCCCTAACGCTAATGGCGGTGCTAAGAAGTTCAAGCAAGAAATGGAGTCAACTGGTATAGGAAGCAAATCAAAGCCTTGCACCAAGTTCTTCAGCACATCGGGATGTCCTTTTGGGGAGAGTTGTCACTTCCTGCACCATGTTCCGGGTGGATACAATGCTGTTGCTCAGATGATGAATTTGCCGCCAGTATCAAGAGTTGCTCCACCCCCTCCAGCTGCACCAAATGGCTCTGCCGCCACAGCTAAGACCCGCATGTGCAAAAAATACAATACTGCTGAAGGGTGCAAATTCGGTGACAAATGCCATTTTGCCCATGGCGAGTGGGAACTCAACAAGCCTGTCGCTCCATCATTTGATGATCCTCGTGCGATGGGCCCACCGATGCAAGGACTTCATGGTATGCGAAATGAGCCACCTGCTCCAGCCGGTCTTGCTCCCGGTTTTGGTGCCTCAGCAACTGCTAAGATCAGTGTAGACGCCTCTCTAGCAGGAGCCATCATCGGAAAAGGTGGTGTGAACTCGAAGCAAATTTGCCGACAGACTGGTGTGAAGCTTTCCATTCGGGAGCACGAGTCTGATTCAACCCTGAGAAACATTGAGCTCGAGGGGACATTTGATCAGATCAAGCTGGCAAGTGCTATGGTGAGGGATCTCGTTGCCAGTGTAACCGCAGCTGCTTCTCAGAAAGCTCCCAGTGGAGGACCTGGAGGCCGTGCGCAACAATCAAGTAATTTCAAGACCAAGCTTTGTGAAAACTTTTCCAAGGGTTCGTGTACTTTTGGGGACCGGTGCCACTTTGCTCACGGGGCTGCCGAGCTACGGAAATCTGCAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_69353.p1 GENE.R_Transcript_69353~~R_Transcript_69353.p1 ORF type:complete len:291 (+),score=58.02,zf-CCCH|PF00642.20|2e-05,zf-CCCH|PF00642.20|3.6e-05,zf-CCCH|PF00642.20|2.5e-09,KH_1|PF00013.25|1e-12,Torus|PF16131.1|0.0023,Torus|PF16131.1|82,Torus|PF16131.1|0.00092,KH_3|PF13014.2|1.5e-07,zf-CCCH_2|PF14608.2|1.7,zf-CCCH_2|PF14608.2|0.013,zf-CCCH_2|PF14608.2|0.0034 R_Transcript_69353:304-1176(+)
MADFRKRGRHDGPNANGGAKKFKQEMESTGIGSKSKPCTKFFSTSGCPFGESCHFLHHVPGGYNAVAQMMNLPPVSRVAPPPPAAPNGSAATAKTRMCKKYNTAEGCKFGDKCHFAHGEWELNKPVAPSFDDPRAMGPPMQGLHGMRNEPPAPAGLAPGFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGVKLSIREHESDSTLRNIELEGTFDQIKLASAMVRDLVASVTAAASQKAPSGGPGGRAQQSSNFKTKLCENFSKGSCTFGDRCHFAHGAAELRKSAV*

Click here to download the sequence:
Link to NCBI Protein BLAST