Transcript Information: R_Transcript_6940.p1


Annotated TAIR IDAT5G43670.1
Annotated Gene NameSec23/Sec24 protein transport family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17539025-17541733 | Reverse length=794
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.998320679875
Replicate 24.5598026156607
Replicate 37.6355791987175
Condition 2: 8 Hour
Replicate 18.5947859284522
Replicate 28.0465294504266
Replicate 315.607634889499
Condition 3: 24 Hour
Replicate 113.594964128527
Replicate 210.080812775744
Replicate 314.591803124598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6940.p1 GENE.R_Transcript_6940~~R_Transcript_6940.p1 ORF type:complete len:792 (+),score=137.92,Sec23_trunk|PF04811.11|3.6e-55,Sec23_BS|PF08033.8|1.5e+04,Sec23_BS|PF08033.8|7.8e-25,Sec23_helical|PF04815.11|9.5e-25,zf-Sec23_Sec24|PF04810.11|1.9e-14,Gelsolin|PF00626.18|6.3e-08 R_Transcript_6940:673-3048(+)
ATGGACTTTCTTGAGTTGGAGGCAATTGAAGGCCTCCGCTGGTCATGGAACTCATGGCCAGCATCAAAATCTGAGGCCACATCTCTTGTAATCCCGCTGTCCATCATGTGCACGCCGTTGATGGAGTCCTCTGAGCTTCCAATTCTTCCGTATGAACCCTTATTGTGCATGAGATGTGGTGCCGCTTTAAACCCATTTTCTCGTGTGGACTACCAATCAAAGATTTGGCTTTGCCCTTTTTGCCATCACAAAAATTTCTTCCCCAAGTCTTATGCTGGGATTGGTGAGAACAACCTTCCAGCTGAACTCTTTCCCACATACAGCACTGTGGAGTACCATCCTGGTAAAAGTAATCTTCCAGTGTCAGGCTCAGGCTCAAATTTGAACCTCAGGCCCAACTGGGGTAATGGGCTGTCTTCATCTTCTCTTTCATCACTGATGTCCTCTGGCAATTCCTCGACTACTTCATTAGGTGTTACCGATCCTAGGGTAGCCAGCATGGGTCCAGCATTTGTGTTCGTGGTGGACCTTTGCACAGCAGAGGACGAGCTGAGGGCATTGAAGAATGAGCTGCTACTTTTGGTGTCCCAACTTCCAGAGAATGCACTGGTGGGATTGATAACTTTTGACTCGATGGTGAGGGTCTGGGACCTTGGTTTTGCTGATTGTAATAGGGTTGTGCTCTTTCATGGTCATCGAGAGATTTCCTCTACTCAGATTCAACAGTTTCTTCAACTTCAAAATATGAAACAACCTCATCTTGGAAAGGCTGTGACCGTTCAAAAGCAAGGTTTTCTCCTACCATTGTCTGAGGTTGAGTTTAGCATCACAGCAGCAATTGAAGAAATCCATTCTTCAGGGACAGTCATGCCTGGTCATCGCCCTCTGAGGGCTACCGGGACAGCAATATCTGTTGCAGTTGGACTTATCGAAGGATGTGTGGTGAAAACAGGTTCTAGGGTCATGATCTTCACATCTGGGCCGGCAACTATTGGCCCTGGCATCGTTGTGCAGTCTGACCGTAGCTACTCCATCAGAAATCACAGGGACCTGATTAATGGGCATGCACCCTATTTTGACAAGTCTTACAGCTTTTATAAGAAATTATCCCAGCGTTTGTGTGATGCATCTGTGGTCCTTGATTTATTTGCCTGCTCTTTGGATCAAGTGGGAACAGCAGAGTTAAAAGTGCCTGTTGAGAGCTCAGGTGGATTCATGATGTTAGGAGAACTATTCGAGTCAGATCAGTTCAGGAAAAGTTTGCGTCACCTATTTAATCGTGACAATGATGGGAACTTAAAGATGTGCTTTGATGCATCTATTGAAGTAGTCACAACTGGTGATATTAAAATCTGTGGTGCCCTTGGTCCCTGTGTGTCTTTACGAAAAAGGAGTGGTATAGTAAGTGATACTGAGATTGGGGAGGGTGCCACCAATACATGGAAGTTGTGTTCTCTGACCAACAAAACATGCATTGCGTTTTTCTTCGAAGTCAATGGCAATCAGAAAGTTGAACCTGGCTCTGCCTTTTTTATTCAGTTTATCATCCGTTATCAATATGGAGCGACAGGGTCTCGGAAAAGGGTGACAACTGTAGCAAGAAGGTGGGTAATAAAGCATTCTCCGGAGATTTCTGCTGGCTTTGATCAAGAAGCAGCAGCTACAGTGATGGCCAGGCTTGCCATCGACAGAGCAGAGAAGCATTATGTTAGAGACGTCATCAGGTGGCTGGATGATAATCTAATACGATTTGCTTCCAAATTTGGAGACTATATTACAGAAGACCCGTCTTCATTTCGCCTTTCAACCAACTTTTCTCTGTACCCACAATTCATGTATTATCTAAGAAGATCCCAGTTTATTGATGTGTTTAACAGCAGCCCTGATGAGACAGCTTTCTTCAGATTGATGCTAAATCGTGAAGGAGTGGTGGGTTCTCTGATCATGATTCAACCCACTCTTCTCCAATATTCATTCGATGGCCCTCCTATTCCAGTCCTCTTGGATATATGCTCAGTGTCTTCAGATGTAATTTTGCTTTTTGATTCATACTTTTATGTGGTCATCCACTATGGATCAAAAATTGCTCAGTGGCGGAAGCTTGGTTACCACAGGGACCCTAACCATGAGAATTTCAGAAAGCTGTTAGAAGCACCAGATCTGGATGTGGAGCAACTTGTTACTGAACGGATGCCTGTGCCTAAACTCATCAAATGTGACCAACATAGTAGTCAGGCTCGGTTTCTTCTCGCCAAACTGAACCCCTCTGTTACCCAGAACTCAACATATACTGATGGTTCAGAAATTATATTCACCGATGATGTGAGCTTGCAAGTTTTCATAGAGCACTTGCAGGAGCTGGCAGTGCAGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6940.p1 GENE.R_Transcript_6940~~R_Transcript_6940.p1 ORF type:complete len:792 (+),score=137.92,Sec23_trunk|PF04811.11|3.6e-55,Sec23_BS|PF08033.8|1.5e+04,Sec23_BS|PF08033.8|7.8e-25,Sec23_helical|PF04815.11|9.5e-25,zf-Sec23_Sec24|PF04810.11|1.9e-14,Gelsolin|PF00626.18|6.3e-08 R_Transcript_6940:673-3048(+)
MDFLELEAIEGLRWSWNSWPASKSEATSLVIPLSIMCTPLMESSELPILPYEPLLCMRCGAALNPFSRVDYQSKIWLCPFCHHKNFFPKSYAGIGENNLPAELFPTYSTVEYHPGKSNLPVSGSGSNLNLRPNWGNGLSSSSLSSLMSSGNSSTTSLGVTDPRVASMGPAFVFVVDLCTAEDELRALKNELLLLVSQLPENALVGLITFDSMVRVWDLGFADCNRVVLFHGHREISSTQIQQFLQLQNMKQPHLGKAVTVQKQGFLLPLSEVEFSITAAIEEIHSSGTVMPGHRPLRATGTAISVAVGLIEGCVVKTGSRVMIFTSGPATIGPGIVVQSDRSYSIRNHRDLINGHAPYFDKSYSFYKKLSQRLCDASVVLDLFACSLDQVGTAELKVPVESSGGFMMLGELFESDQFRKSLRHLFNRDNDGNLKMCFDASIEVVTTGDIKICGALGPCVSLRKRSGIVSDTEIGEGATNTWKLCSLTNKTCIAFFFEVNGNQKVEPGSAFFIQFIIRYQYGATGSRKRVTTVARRWVIKHSPEISAGFDQEAAATVMARLAIDRAEKHYVRDVIRWLDDNLIRFASKFGDYITEDPSSFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDETAFFRLMLNREGVVGSLIMIQPTLLQYSFDGPPIPVLLDICSVSSDVILLFDSYFYVVIHYGSKIAQWRKLGYHRDPNHENFRKLLEAPDLDVEQLVTERMPVPKLIKCDQHSSQARFLLAKLNPSVTQNSTYTDGSEIIFTDDVSLQVFIEHLQELAVQE*

Click here to download the sequence:
Link to NCBI Protein BLAST