Transcript Information: R_Transcript_6944.p2


Annotated TAIR IDAT5G40520.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; Has 3696 Blast hits to 2485 proteins in 391 species: Archae - 10; Bacteria - 571; Metazoa - 1013; Fungi - 530; Plants - 217; Viruses - 74; Other Eukaryotes - 1281 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16231515-16234276 | Reverse length=693
E-Value7.4E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2308636220159
Replicate 23.451880460598
Replicate 33.6623140048147
Condition 2: 8 Hour
Replicate 13.3238730697618
Replicate 24.3844866355266
Replicate 35.8588909091445
Condition 3: 24 Hour
Replicate 16.0597530389868
Replicate 24.4243581183209
Replicate 34.6878643522465


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_6944.p2 GENE.R_Transcript_6944~~R_Transcript_6944.p2 ORF type:complete len:663 (+),score=135.58 R_Transcript_6944:414-2402(+)
ATGCAGCCTCTGGACACAGATGCACATGCTATTGAACAATCTTTGCGGGAACATGAAAAAGATCTTTGGTGTAAGAGAAAGTTTTTGATGGGATTATATGCTGTACCAGGCAATGATCATCACATGAGGTCATATGCCAGAAATCAGTCATTTCTGCCTGAGTCATTCTTGAGGAAAGATGATGTCTTCTATGAAGATGTTAAACAGCTTGTTGAGAAAGGCTTTGGAGCAGTTAATACTCACATATGGCAGGAGATAACTCCTGATGATGTAGAATTCCGTGATCTACACAGTATGTTGAAAAGTATTTTGACCTCACTAGATGACTTTTCAAACAGTGGGCTATACCATTTAGCCAAGATAGTTACCAGAGATTCAGTTGCATTCTGTAAAACCCGTTCACAGATGAAGAAAGTTATCAAAAAAGGTCTCTCAGATATACAGAACAGCAATTTGCCTAACGATCACGCCAGAACTCAGAGTGAAATATCCCAACTGCTGAAGAACCAAAGGATTTTCCGGCAGAATCATGTGCAGCACTTAAATATGACTCTGAAATCTCATAGTGATGTTGTTATGAAGGTTGTGAATGGACTCGAGGCCATGCGTACTCGGACCCTGTTGGCAATGCACCGTAAACTCAATGGCACCCATGGATACAAGCCCCAGTTATACCCTCAAAGAACTGGATGGAAAAGGGATCGTTTGATTGATAGGGTTAGGGCATTGTGTCTGGGCATGATCAACCAACTTGGCCCAGCAGATAAGCTACCAGAACCTTTGGCCAAAGCAATGGCAGTGGCAGGTTTATCATCCAGGATATATGCTTTCCAGCATGATCTTTCTCAGGCCACATTTGTTCATCTGCCTCCAGAAGTAGAGACATTACAGAATCAATTACTAAAGGCTATTCATTCATTTAAGGCGTTATTTCACAAAAAAAACAAATTAAAGACAGTGGTACACCTCTTGGACCCTGGACATAAAGGGGAGAGAAGGATCATAGCAAGAGCAGTCAAGAATATGTTGGTAGACTTTCTTTTCGAGTGCAGTGATATGGAGGCAATTCCAGATTCATTATTAGACGCTCTATCTTATATCAATAAGATGAGACCCAGTATGCACAGACTTCTCACCAAAGATTTCCTTGAAGAAGAGTTAGAATGTATATTGAATGTAAGTGCTCATATAAGGCAAGTTTTGTGGGATCATGTTTCTGTTGATGATATTGATCAAGATTTTGCGAGTGCATACATGGAGGAACTGGAAGAAAGTGACGATGGAGATATTTTTGATGAGGATGATGACAGGCCACAGCTGCACATAGATGCCTTGCATGAGGTTCACGTCAAGCTCAATGTCTTCAATGAAGAAGTACAAAGTACTGGAGATCCAGAGCAGGCCAGTTTTGGTTCGTCACTAGGTCATTTGGATGATACCAATGAATCTTCTAGTTCGTCATTTGGGGCCACAGGATATGTCGATGATGTTTTATGTGCAAATACAGATATTGGTGGAGGTGACCTGCTGATGTCAACATCTTCTGGAAGTGACGCGTCTCCTCTTGGTTCACCTATATTACAGAAATCTGGTGATAGTGTGGACAGTCAAGATCCTGAAAACAACGCTGCAGTTGATTCAGTCAATCTTACATGCTCGGAAGAAAATCCAATGCCTGAAGATCAGGACAAAGTAAAAAACCGATATGCTGTCGTCCAACAAGTATGTGATCAAGTAAGTGTGGTTGCTTACCAGCTTCTTGGACATGTTTTGGAGGAGTTTGGACGGAGGGAAGCATTAGAACTAGACGGGGATGATGAATTATACCTTTTTGGTGAATATTCAAGGCCGGAACAATTCCAAGGCCTGTTAGCAAACTCAATAGACAAAGATTCTGATGGTGCAATCATTGTTCGAGCAGTTCACAAAGTTGTACCCTCATTGTCTAACAGTGAACTGGAGATAGTGAAGAAGATCATGAGCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_6944.p2 GENE.R_Transcript_6944~~R_Transcript_6944.p2 ORF type:complete len:663 (+),score=135.58 R_Transcript_6944:414-2402(+)
MQPLDTDAHAIEQSLREHEKDLWCKRKFLMGLYAVPGNDHHMRSYARNQSFLPESFLRKDDVFYEDVKQLVEKGFGAVNTHIWQEITPDDVEFRDLHSMLKSILTSLDDFSNSGLYHLAKIVTRDSVAFCKTRSQMKKVIKKGLSDIQNSNLPNDHARTQSEISQLLKNQRIFRQNHVQHLNMTLKSHSDVVMKVVNGLEAMRTRTLLAMHRKLNGTHGYKPQLYPQRTGWKRDRLIDRVRALCLGMINQLGPADKLPEPLAKAMAVAGLSSRIYAFQHDLSQATFVHLPPEVETLQNQLLKAIHSFKALFHKKNKLKTVVHLLDPGHKGERRIIARAVKNMLVDFLFECSDMEAIPDSLLDALSYINKMRPSMHRLLTKDFLEEELECILNVSAHIRQVLWDHVSVDDIDQDFASAYMEELEESDDGDIFDEDDDRPQLHIDALHEVHVKLNVFNEEVQSTGDPEQASFGSSLGHLDDTNESSSSSFGATGYVDDVLCANTDIGGGDLLMSTSSGSDASPLGSPILQKSGDSVDSQDPENNAAVDSVNLTCSEENPMPEDQDKVKNRYAVVQQVCDQVSVVAYQLLGHVLEEFGRREALELDGDDELYLFGEYSRPEQFQGLLANSIDKDSDGAIIVRAVHKVVPSLSNSELEIVKKIMSL*

Click here to download the sequence:
Link to NCBI Protein BLAST