Transcript Information: R_Transcript_69718.p1


Annotated TAIR IDAT3G53400.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 47 (TAIR:AT5G03190.1); Has 285 Blast hits to 285 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19798526-19799926 | Forward length=466
E-Value5.3E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.331455473372
Replicate 212.64994497131
Replicate 317.595030327479
Condition 2: 8 Hour
Replicate 113.991922826997
Replicate 217.453524749745
Replicate 321.045345646825
Condition 3: 24 Hour
Replicate 121.674451544168
Replicate 219.589453548774
Replicate 322.38618243339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_69718.p1 GENE.R_Transcript_69718~~R_Transcript_69718.p1 ORF type:complete len:483 (+),score=112.84 R_Transcript_69718:505-1953(+)
ATGATAGTTATGGGTGGTGGGGGATCAAGGAATTCAGTGCCACTCAAGACACTGAAATGGCAAGCCCTATATGGGTCTTTGGCCAAACTATTGGCTATCCGTACGATGATGTTCGCTATTGCTATTTCAATGCTGCCTCTTGTGCAACTTGTCTATGATTTTGACCCAACAAAACCCTTTTTCTTAAGCTCTAATGATGATTGTGAATCTAATAATAATATTGGGTTTTCGGGTCATAATTCTGTGTTGGGTAAGTTTCTAAAACCTGTTACCCCAGTTGCATTTCCACATCTGAGGACTGGAATGTGCAAAGAAAATGTGAATTTGACTGTGGATGTGGTGAATGAGCTTATGAGCAAGAACTTGTTGAATCACGATGCAAAAGCTCTTTGTATTGGACAGGGCTCGGCTGAGGCCGAATTCGCCTTGCATGAAATGGGATTCTTAAATGTTGATGTAATTCATAGGCACCCATTTTTCTCACTCAAGCAAAAGCAACTTATATACGAGCTTAATTTTGATGAAAATTTGTTCAATTTTGTCATTGCAAGAGACCTTAAGAAGGTTTCTGTTCCTGCTCTCCTTGTGAATGAGGTTGAGCGAATTCTTAAGCCTGGTGGGGTTGGGGCTATGCTTGTGGCTAGCCATAATAGCTTGATTAGGTCTGCAACCTCAGTTTCATCCTTCCTCAAGAGCTCCAATGTGGTCCATGTGGTTGGGTTAGGCAACTTTGCTTTGGTTGCATTCAAGAAGAGGGCTAATCATGAATTGGGCTCTTTTGATGAGTTTCGTCTCCCTACAATTTGTCCTTCCATCAAGAGAAACAAGCCCTTTATGAACAACTTGGAGCCTCTTGTTGAGAACAAGGAATCAAGGGGTTATGATATTGATAAGAGAATTGCTTATCTACCACAGTTTGTTGATGTACCCATCAAGGGGAAGAAGTTGATTTATGTCGATATGGGGGCAAAACAAGCTGCAAACTTTAGTGGTGACAATTGGTTCTTGCCCTCTTACCCTATAAACTCAAAAGCATTCAGTGTTTACATTGTTGATCATGATGCTTTAGTCTTGTCTTCTCATGTGAAGACCCCTGGTGTGACCTTCATTTATCATCCAGCACTAGCAGGAAATGTTGTTGAACATGAAATTGGCACTAGTGTTGAAGAGGAGCCACTTCTTGGCGAAGATGAGTTTGACTTCTTTGTGTGGTTCAAAGAAACAGTGGAATTTGCAGATTTTGTGGTCTTAAAGATGAATGTTGGGAAATCTGAAATGAAATTTTTATCAGAATTGTTTGAAAGTGGCATAATATGCTATGTTGATGAGCTCTTCCTGCACTGTCCTGAATCAGACCACAATGGCAATGCTGGTAGAGGTTGCAATACCGATGTCTTAAAGAGCCTCAGAAAGGTTGGTGTGTTTGCCCATCAGTGGTGGGGGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_69718.p1 GENE.R_Transcript_69718~~R_Transcript_69718.p1 ORF type:complete len:483 (+),score=112.84 R_Transcript_69718:505-1953(+)
MIVMGGGGSRNSVPLKTLKWQALYGSLAKLLAIRTMMFAIAISMLPLVQLVYDFDPTKPFFLSSNDDCESNNNIGFSGHNSVLGKFLKPVTPVAFPHLRTGMCKENVNLTVDVVNELMSKNLLNHDAKALCIGQGSAEAEFALHEMGFLNVDVIHRHPFFSLKQKQLIYELNFDENLFNFVIARDLKKVSVPALLVNEVERILKPGGVGAMLVASHNSLIRSATSVSSFLKSSNVVHVVGLGNFALVAFKKRANHELGSFDEFRLPTICPSIKRNKPFMNNLEPLVENKESRGYDIDKRIAYLPQFVDVPIKGKKLIYVDMGAKQAANFSGDNWFLPSYPINSKAFSVYIVDHDALVLSSHVKTPGVTFIYHPALAGNVVEHEIGTSVEEEPLLGEDEFDFFVWFKETVEFADFVVLKMNVGKSEMKFLSELFESGIICYVDELFLHCPESDHNGNAGRGCNTDVLKSLRKVGVFAHQWWGN*

Click here to download the sequence:
Link to NCBI Protein BLAST