Transcript Information: R_Transcript_69758.p1


Annotated TAIR IDAT4G33780.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16202174-16203617 | Reverse length=203
E-Value2.3E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.08085559364
Replicate 210.948070931355
Replicate 310.962510135301
Condition 2: 8 Hour
Replicate 19.7943459788981
Replicate 214.85401436593
Replicate 316.0771408352
Condition 3: 24 Hour
Replicate 113.2827313246
Replicate 210.082404064264
Replicate 310.943852343449


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_69758.p1 GENE.R_Transcript_69758~~R_Transcript_69758.p1 ORF type:5prime_partial len:140 (+),score=14.94 R_Transcript_69758:2-421(+)
AATGAGAGCCAAAAATGGAATCGATTCGATTTCGACAATTACAGAGATTACGACGACGAAGATGATGAAGAAGAAGAGGAAGAAGAAGATCGGAGTTTAGACTTGCTAGTTAGGTTTGTCCAAAATATCTTCCGAAAAATATCTAAACGAGCTCGTAAGGCCGTTCGTTCCGTTCTCCCTCTCGCTATCTCCACCAAATTGGTGGGATTTGCTGTCAATGGATTCATAATCTTGTCATTTTTATGGGTCTTGAAGGCTTTTCTTGAGGTTGTTTGTACGCTTGGAAGTGTTGTCTTTGTGAGCATTTTACTAATCCGTGGAGTATGGTCTGGTGTATTATACTTACAAGAAAACCGCAATCGTCTAAATGGATTTGATGAGGACCATCCTGCATGGAATGGAGCAGAGCCTGTAACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_69758.p1 GENE.R_Transcript_69758~~R_Transcript_69758.p1 ORF type:5prime_partial len:140 (+),score=14.94 R_Transcript_69758:2-421(+)
NESQKWNRFDFDNYRDYDDEDDEEEEEEEDRSLDLLVRFVQNIFRKISKRARKAVRSVLPLAISTKLVGFAVNGFIILSFLWVLKAFLEVVCTLGSVVFVSILLIRGVWSGVLYLQENRNRLNGFDEDHPAWNGAEPVT*

Click here to download the sequence:
Link to NCBI Protein BLAST