Transcript Information: R_Transcript_70048.p1


Annotated TAIR IDAT1G56660.1
Annotated Gene Nameunknown protein; Has 665200 Blast hits to 205811 proteins in 4684 species: Archae - 3320; Bacteria - 107592; Metazoa - 249086; Fungi - 76753; Plants - 38542; Viruses - 3008; Other Eukaryotes - 186899 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21238809-21240377 | Forward length=522
E-Value9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6917378445837
Replicate 21.2973323834461
Replicate 31.8250896621325
Condition 2: 8 Hour
Replicate 11.2740612655477
Replicate 20.96351767283157
Replicate 31.4462258868276
Condition 3: 24 Hour
Replicate 11.6985044371716
Replicate 21.434488383127
Replicate 31.672718894771


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70048.p1 GENE.R_Transcript_70048~~R_Transcript_70048.p1 ORF type:5prime_partial len:1230 (+),score=393.43 R_Transcript_70048:3-3692(+)
TCAGGTGTGGAGAAAATACTCCCTGCAGAATGTGAATGTCAAGGTGAACTGAGAACTGAAGCATTGCAGTTTGATCATGAGGATAGCGGTGCTAATTTGATGCTTGTGCCTATTGAGAGTGTCAAGGAATCAAATGCTACTCTTATTAAGGGTGAATACACCAAGGTTTCTGGATTTAATGTTGATGGTGATGCTTCCAACTTCAATGACAAATTGGAGAAGGTGGTCTGTGGGAGGAGTTTTTGTGCTGCTGATATGGCAATTGTTCCTTTCAAGGGAGATAGTTCTGAATTTGCAGAGAAGAAAGAGATTGTTTGCTGTTTGCCTTTTGATCTTCCAAAAGAACCAAAAAAAGTGCATCGTCCAAAGAGGAGGCCAAGCCAAGAGGGACTGCCTTCTTCTTATGAGTCAATGCTGGCTTCTTCTGTTTCCCCTGTTGGTCCAAAGTTAATTGAGCTTGGGGAGCTATGTGAGGTTCCATCACAGCTAAATAAAAAGACTGAGGTTACTTCTGCATTGTTAGAGCCTTCAAATTTCAAGGATTTGCCTTTTCAAAGTCAGCAAGCTTACATGTCATGTCCACGTTTACCAACACTTGTGATATCTTTTGAGAAAGGTTCCATTGAAACTAAGTTTGAAAAACAGAAGTTGCATTCAGAGTCATCACCTTCTTGTCACCGACTGGAGATTATGTCACCAGTTGACGATGACTTTGATGGACCTCTGCAGCAGGTCTTAAGCAACAATTCTAAGCAGAGAAAGCTTTCATTTGAAAACAGCACACCAAAGTCTCCTTTAGCATCATCATTGATGTCACGTCAAAGGCTGCAGGCTGTATTCCCTGATCCAGAAAACCCTTCGGAATTGATCCGACCCAGAGGAAAAGAACTGACCTGCATTAAGAGAAATCAAAAACAAGGGCAGAAGCTGCAACATCCAAAGAGGCAACTTCGTCCATGGATCCAAAAGCGTTATGATCTTGTAGAAGATGGTGTTGTAGCACCTGAAAGAGAGGTATTGTTGTCATCTGACCAGAAGGAAGGGAGTTATGATGGTAAGGAAGACGAGAATCCACACGACATTACATCTCGACAAATAGCAATGGAGCATCAACAACAAGGAGAGTGTCAAGATCAAGGAAGCTCACCTCATATAGAACTGATGGAAGAGACTGTGTACTTGGATAATCAGCATCATGACTTGGGAGGGATTCAACAGAAAACGGTAAGATATGGTCTTCATAAAGCATGTGAACTCGATTTAAGAGACCCATCACCAGGTCAGAAGAAGAATGGACAGCAACAGAGCCAGAAACAACAGCATCAGAGGGAAATGGCTGAAGTTGTTTGTTTTGATTCAGAGCCAGTTACCAATGTGGCAACATATACACAATTGGTCCTTGATGATGAGCAATTTCAGTCTATCGAAAAGCAGACAGATAAACCTCAGCAAACAACTAAAGTTGGTTTAACAGAGACATTGTCAACACAGAATAAAAAAGGAAAGCAAAAGGACCAGGAACAGCAGCATCAGGGTAAAACAGCTGAAGTTGGTTGTTCTGATTCAGAGCTAGTAGTGCCAATTGCTACAATGGAGGAAAAGATGCTGTCTGAATCAGTACCACAAAAGCCAGAACAACTTGAATGTGAACTTGGGATTCAGGATTCAGGATCCACTCTCCCTAAACAGCCTGAGAAAAAGCGCCGAGGAAGGCCCCCGAAGAATTATTCATCTTCATTGGATTCGCTTCAACATCAGCAAAACAAAATGTCTGAATCAGTACCTCAAAAGCATTCTCGGAAGCAAAAAAAGTGTGGCAAGAAAGATGGCCATAATTTGCAAAGGAAACAGGAAGAAGCGACCAAGGAAGATGTGGCCATTGCAGAGAATTTGCGTGATCAGCCGCAAAGTGAGCCATGTGAAACAACTCCATGTAAGCTTATGAAGAAGAGGGCCCTCGGAACACCAAGGAAATCGAAAGAAGCAGCTGCAGAAGACTTGACACCTCTAAATATGGATGATCAGCAGCAACAAGAGCAACATGAACCTGCAGGTCATCAACTGATGAAGAAAGATGACCAAAAAACACCAAGGAAGCGAAAGAGAGCAGCCAAAGCTGTGGGAGATCCACTAAATGTGTTTGGCCAACAGCAAAAAGGGGCAGCTGAAGTAGCAACTTATCATCTGGAAAAGAAAGATGGCCGAGGAAGGCGAATGAAAGAGAAAAAAACAATTGCAGGAGATGTGGCAGCTCAACCAAAATGGTCGGATGAACAGCAAAAAGGATTGGCTGTCCCAAGTTTGCATGCTGAGCAACATGATGGGCCATCTGCACGGGTACTTTATCAGCTGAGAAGGAAAGACGTCCTAGGAAGTCTAAGGAAAGAAGAAGCACCAACCACAAAAAATGATGGTGCTTTGGATAGTATGCGTGATGGGCCAGAGGGAGGGCCAAGTCCCCCGAATTCCCATGGTCAGCAAGAAGAAGGGCCAACTTCCTCAAAATTGCATGGTCGGTCAGAAAAAGGGTCAACTCCTCAAACTGTGCATGGTCAGCCGCAAAAAGGGCCAACTGACCCTGAAACTAAACAGATGAAAAAGAAAAGAGGCCGAGGGAGGCCAAAGAAGAAAGAAGCCACCACCATACGAGGTATTTCAATATCACATGATCAGCAACAAGAAGGCCAGGCTCAGCAAAAGTTACATGATCAGCTAGAAGGGCTAACTCCCCCAGTTTCACATGGGCCAACTCCCAAGAATTTGCATGATCAGCTGGAAGAAGTGCCAACTCCTAGAAATACACCTGATCAGTTGGAAGAAGGGAAACATGAACCAGTCACCAATCAGCAGAAAAAGAAAGCTGGACGAGGAAGTTCAAGGAAGATAAAAGCAATCATAGATGATGTAACCGGTGTGCCAACTTCAGATAATCAGCAGGAAGAAGGGATAACTCCCCCGAGTGTGCTTGATCAACTGAAACAGAGAGCTGGCGGTGGAGTTACATGGAAGAAAAATGCACCTACAAAAGATTCGGAGGATGTGCAAGATTCACATAATCAGCAAGCGATGAATCACCCAAATGTGCCTGATCAGCTGGAAGTAGGGCCAAATGGACAGGCAACTAATCAGCAGAAAAGGAAAGTTTGCCGAGGAATGCCAAAAAAGATAGAAGCAACCACGGAAGATGTTTTAGGCCTGCCAAAGTTGCCTGATCAGCAGGAAGAAAGGCTAACTCCCCCAAATTTGCCTGATCAGCACGAAGGCAGGGCAACTTCCCCAGTTTTGCATGATAAGCTGGAAGAAGGGCTACCTGCACCAGAAACTAATCAGATGGAACTGGAAAAAGGCCAAGGAATACTGAGGAACAAGAAAGAAGCAACCACAGAAGATGAGGCAAGGCTTCCAAAGTTGCCTGAGCATCATCAAGGAGAGCTAGCTTGCATGAACATACTCTCACATGACAAGACTCCACAACAGCTGGCTCAAGAAGAGCATAGCCAAGATCAGCTGCCAAAATCGGAACTTGTGGCAACACCCTTAGGCAATCAGCCATCAAAAGAGCAAGAGGAACAGTGCAAGGAGATGGTTACCAAACAAAAGTCAGTTAAAATGAAACTGATAGAAGTTCCGCTTTCCTTCAAAGATCAGCTGCGTTCAAGGATGAAACGCCCATATCAGGCTGGAACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70048.p1 GENE.R_Transcript_70048~~R_Transcript_70048.p1 ORF type:5prime_partial len:1230 (+),score=393.43 R_Transcript_70048:3-3692(+)
SGVEKILPAECECQGELRTEALQFDHEDSGANLMLVPIESVKESNATLIKGEYTKVSGFNVDGDASNFNDKLEKVVCGRSFCAADMAIVPFKGDSSEFAEKKEIVCCLPFDLPKEPKKVHRPKRRPSQEGLPSSYESMLASSVSPVGPKLIELGELCEVPSQLNKKTEVTSALLEPSNFKDLPFQSQQAYMSCPRLPTLVISFEKGSIETKFEKQKLHSESSPSCHRLEIMSPVDDDFDGPLQQVLSNNSKQRKLSFENSTPKSPLASSLMSRQRLQAVFPDPENPSELIRPRGKELTCIKRNQKQGQKLQHPKRQLRPWIQKRYDLVEDGVVAPEREVLLSSDQKEGSYDGKEDENPHDITSRQIAMEHQQQGECQDQGSSPHIELMEETVYLDNQHHDLGGIQQKTVRYGLHKACELDLRDPSPGQKKNGQQQSQKQQHQREMAEVVCFDSEPVTNVATYTQLVLDDEQFQSIEKQTDKPQQTTKVGLTETLSTQNKKGKQKDQEQQHQGKTAEVGCSDSELVVPIATMEEKMLSESVPQKPEQLECELGIQDSGSTLPKQPEKKRRGRPPKNYSSSLDSLQHQQNKMSESVPQKHSRKQKKCGKKDGHNLQRKQEEATKEDVAIAENLRDQPQSEPCETTPCKLMKKRALGTPRKSKEAAAEDLTPLNMDDQQQQEQHEPAGHQLMKKDDQKTPRKRKRAAKAVGDPLNVFGQQQKGAAEVATYHLEKKDGRGRRMKEKKTIAGDVAAQPKWSDEQQKGLAVPSLHAEQHDGPSARVLYQLRRKDVLGSLRKEEAPTTKNDGALDSMRDGPEGGPSPPNSHGQQEEGPTSSKLHGRSEKGSTPQTVHGQPQKGPTDPETKQMKKKRGRGRPKKKEATTIRGISISHDQQQEGQAQQKLHDQLEGLTPPVSHGPTPKNLHDQLEEVPTPRNTPDQLEEGKHEPVTNQQKKKAGRGSSRKIKAIIDDVTGVPTSDNQQEEGITPPSVLDQLKQRAGGGVTWKKNAPTKDSEDVQDSHNQQAMNHPNVPDQLEVGPNGQATNQQKRKVCRGMPKKIEATTEDVLGLPKLPDQQEERLTPPNLPDQHEGRATSPVLHDKLEEGLPAPETNQMELEKGQGILRNKKEATTEDEARLPKLPEHHQGELACMNILSHDKTPQQLAQEEHSQDQLPKSELVATPLGNQPSKEQEEQCKEMVTKQKSVKMKLIEVPLSFKDQLRSRMKRPYQAGT*

Click here to download the sequence:
Link to NCBI Protein BLAST