Transcript Information: R_Transcript_70201.p1


Annotated TAIR IDAT1G17370.1
Annotated Gene Nameoligouridylate binding protein 1B
Annotated Gene Symbol(s)UBP1B
Annotation TypeOrtholog
Chromosome Positionchr1:5951842-5954825 | Reverse length=419
E-Value1.3E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1135.9023775349
Replicate 297.617870655869
Replicate 3114.15371839978
Condition 2: 8 Hour
Replicate 1106.82103641677
Replicate 2127.59479496108
Replicate 3145.60000462088
Condition 3: 24 Hour
Replicate 1155.48202146156
Replicate 2125.95538845093
Replicate 3149.8944704861


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70201.p1 GENE.R_Transcript_70201~~R_Transcript_70201.p1 ORF type:complete len:422 (+),score=78.26,RRM_1|PF00076.18|3.2e-12,RRM_1|PF00076.18|8e-19,RRM_1|PF00076.18|4.7e+03,RRM_1|PF00076.18|1.7e-11,RRM_6|PF14259.2|9.7e-06,RRM_6|PF14259.2|3.7e-11,RRM_6|PF14259.2|2e-08,RRM_5|PF13893.2|9.8e-08,RRM_5|PF13893.2|0.0023,RRM_5|PF13893.2|0.00058 R_Transcript_70201:234-1499(+)
ATGCAGAACCAGAGAATGAAGCAACAACAGCAAGCTTTGATGCAACAAGCTCTCCTTCAACAACAGTCTCTTTACCATCCCGGTCTTCTCGCTGCTCCTCAGATAGAGCCATACCCCAGTGGCAACCTTCCTCCAGGCTTTGATCCCTCTACATGCCGCAGTGTGTATGTGGGTAATATTCATCCTCAGGTCACAGAACCTTTACTTCAAGAGGTTTTTGCTAGTGCTGGCCCTGTCGAAGGTTGCAAGCTGATTAGAAAGGAAAAGTCATCCTATGGCTTCATTCACTACTATGATCGCAGATTTGCCAGCATGGCTATATTAACACTTAATGGGAGGCATTTGTTTGGGCAGCCTATAAAGGTTAATTGGGCATATACCAGTGGTCAACGAGAAGACACTTCAAACCACTTCAATGTGTTTGTTGGCGACCTGAGCCCTGAAGTTACTGATGCTATGCTGTTTGCTTGTTTTTCGGTCTATCCCAGTTGTTCAGATGCAAGGGTGATGTGGGATCAGAAAACAGGGCGCTCTAGGGGGTTTGGATTTGTTTCTTTCCGTAGCCAGCAGGATGCCCAAAGTGCCATTAATGACCTTACTGGAAAATGGCTTGGTAGTAGGCAGATACGTTGTAATTGGGCAACCAAAGGTGCTAATAACAATGATGACAAGCAGAGTTCTGATGCCAAAAGCGTGGTAGAATTGACGAACGGGTCATCAGAAGATGGTAAAGAGGCCTCAAACAGTGATGCCCCTGAAAACAATCCCCAATACACTACTGTATATGTTGGAAATCTTGCTCCCGAGACTACCCAGCTTGATCTCCATCGGCACTTCCACAATTTAGCAGCTGGGTCAATTGAAGAAGTAAGGGTCCAGCGTGACAAAGGTTTTGGTTTTGTCAGATACAGTACTCATACTGAGGCTGCTTTGGCCATTCAGTTGGGCAATACCCAGAATCTGCTTTTGAACAAGCAAATTATGTGCTCATGGGGAAGCAAGCCGACCCCTCCAGGGACAGCCTCGAATCCACTCCCTCCACCCGCTCCTGCACCTCTAGGACTTTCTGCTACAGATCTTCTGTCCTATGAGCGACAACTAGCAATGAGTAAGATGGGAGGAATGCATGCCCTAATGCATACCCAAGGACCACATCCTCTGAATAAGGCTAGTATGGGAATGACTGCTGCCGGAGCTAGCCAGGCTATTTATGATGGCGGTTTTCAGAATGTTGCAGCTGCTCAGCAAATGATGTATTACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70201.p1 GENE.R_Transcript_70201~~R_Transcript_70201.p1 ORF type:complete len:422 (+),score=78.26,RRM_1|PF00076.18|3.2e-12,RRM_1|PF00076.18|8e-19,RRM_1|PF00076.18|4.7e+03,RRM_1|PF00076.18|1.7e-11,RRM_6|PF14259.2|9.7e-06,RRM_6|PF14259.2|3.7e-11,RRM_6|PF14259.2|2e-08,RRM_5|PF13893.2|9.8e-08,RRM_5|PF13893.2|0.0023,RRM_5|PF13893.2|0.00058 R_Transcript_70201:234-1499(+)
MQNQRMKQQQQALMQQALLQQQSLYHPGLLAAPQIEPYPSGNLPPGFDPSTCRSVYVGNIHPQVTEPLLQEVFASAGPVEGCKLIRKEKSSYGFIHYYDRRFASMAILTLNGRHLFGQPIKVNWAYTSGQREDTSNHFNVFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGANNNDDKQSSDAKSVVELTNGSSEDGKEASNSDAPENNPQYTTVYVGNLAPETTQLDLHRHFHNLAAGSIEEVRVQRDKGFGFVRYSTHTEAALAIQLGNTQNLLLNKQIMCSWGSKPTPPGTASNPLPPPAPAPLGLSATDLLSYERQLAMSKMGGMHALMHTQGPHPLNKASMGMTAAGASQAIYDGGFQNVAAAQQMMYYH*

Click here to download the sequence:
Link to NCBI Protein BLAST