Transcript Information: R_Transcript_70315.p1


Annotated TAIR IDAT5G52650.1
Annotated Gene NameRNA binding Plectin/S10 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21355781-21357003 | Reverse length=179
E-Value3.5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.269187036666
Replicate 26.8943075993814
Replicate 36.4959405123417
Condition 2: 8 Hour
Replicate 12.740955031408
Replicate 24.3386785662002
Replicate 35.2829314492171
Condition 3: 24 Hour
Replicate 16.1677691059504
Replicate 26.2544764018055
Replicate 38.4937361471542


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70315.p1 GENE.R_Transcript_70315~~R_Transcript_70315.p1 ORF type:3prime_partial len:134 (+),score=26.19,S10_plectin|PF03501.11|2.2e-31,S10_plectin|PF03501.11|4.8e+03 R_Transcript_70315:168-566(+)
ATGATCATCCCTGAAAAGAATCGCCGTGAGATCTCCAAATACCTCTTCCAAGAGGGAGTTTGCTGGGCCAAAAAGGACTATAACTTGGCAAAGCACCCGGACATTGATGTCCCAAACTTGCAAGTCATCAAGCTTATGCAGAGCTTTAAATCAAAGGAATATGTGAGGGAGACCTTTGCTTGGATGCACTACTACTGGTACTTGACCAATGAGGTGGCCCATCACGTTTTGATGGCGACAGGCCCAGGTTTGGTGACAGGGAGGGATATCGTCGAGGCCCAAGTGACATGGGTGACAAAGGTGGTGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTCCTGGTGGAAGGCCTGGCTTTGGTCGTGGGGCTGGCAGCTTCGGTGCTGGGCCAACCAGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70315.p1 GENE.R_Transcript_70315~~R_Transcript_70315.p1 ORF type:3prime_partial len:134 (+),score=26.19,S10_plectin|PF03501.11|2.2e-31,S10_plectin|PF03501.11|4.8e+03 R_Transcript_70315:168-566(+)
MIIPEKNRREISKYLFQEGVCWAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNEVAHHVLMATGPGLVTGRDIVEAQVTWVTKVVLLLTTDLLLGVLVEGLALVVGLAASVLGQPV

Click here to download the sequence:
Link to NCBI Protein BLAST