Transcript Information: R_Transcript_70333.p1


Annotated TAIR IDAT1G44920.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16983229-16984408 | Reverse length=258
E-Value3.9E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.211040081206
Replicate 211.046834016937
Replicate 311.333647173009
Condition 2: 8 Hour
Replicate 18.7876100681751
Replicate 28.6482853113993
Replicate 310.941563196261
Condition 3: 24 Hour
Replicate 111.518899793691
Replicate 29.1448634424345
Replicate 313.269897615053


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70333.p1 GENE.R_Transcript_70333~~R_Transcript_70333.p1 ORF type:complete len:287 (+),score=59.14,DUF3054|PF11255.4|2.2e-25 R_Transcript_70333:247-1107(+)
ATGCAGGCACTAAGCCAAGCATTGTCAAGCAGAGGGCTTTGCAGCAGCCACTGCTGCTGTTGCGGCTACTCCACCACCACCCGCTGCTCCTTATCTTCCACCGCCGCCACCCGTTCTGTTTCCTTTTCTCTCTCCTCCTCATCTCCCAAAATTTCCGGTCCTGCCACCGCTCGTTTCTCCAAACCCAACCCCAAAACTCGTCGTTTCTCTCGCATCTCTGCAAACTTCCAAAACGGCACCGTTCCCAATCCCACCACCAATGATAATCAACAGCAACAAGCTCCTTCAACTTCAAGCTCAACTTCTTCTTCAGCTCCGGTTATTTTGGGCCCAGAGAGTGTTCCTCTGGAAGGTGTTATCCAATTCGACAAGCCCAATTCCTCTTCTCGTATTCAGAAATGGGGGAGAATTGGGTTATTGGCCAGTGGTGATGTTTTGGCTTTGCTCATGTTTGCTGCAATTGGGAGATTTAGTCATGGTTTCCCTGTTTTCGACCCTGAAACCCTGCGTACTGCTGACCCATTGATTGCCGGGTGGTTTTTGAGTGCATACTTTCTAGGAGGTTATTCTGAGGATGGTAGAGGAATGAATGGTTTGTCTAAGGCTGTTTTAGCTGCTGCAAAATCCTGGGCCTTAGGTGTACCTATTGGATTGGGCATACGAGCATTATCTTCAGGGCATTTTCCTCCCACCAATTTTATTTTGGTGACGCTGGGAAGCACAGCAGTTCTGCTAATTGGTTGGAGAACAGTGCTATTCCAGCTACTCCCTAGTGACAAGGGCAAGAAAGATGACATGTACAGGCGTGGAAATCCATTTGAACTGTTTGAGTTACTAACTTCACTGGTCAGGAGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70333.p1 GENE.R_Transcript_70333~~R_Transcript_70333.p1 ORF type:complete len:287 (+),score=59.14,DUF3054|PF11255.4|2.2e-25 R_Transcript_70333:247-1107(+)
MQALSQALSSRGLCSSHCCCCGYSTTTRCSLSSTAATRSVSFSLSSSSPKISGPATARFSKPNPKTRRFSRISANFQNGTVPNPTTNDNQQQQAPSTSSSTSSSAPVILGPESVPLEGVIQFDKPNSSSRIQKWGRIGLLASGDVLALLMFAAIGRFSHGFPVFDPETLRTADPLIAGWFLSAYFLGGYSEDGRGMNGLSKAVLAAAKSWALGVPIGLGIRALSSGHFPPTNFILVTLGSTAVLLIGWRTVLFQLLPSDKGKKDDMYRRGNPFELFELLTSLVRRW*

Click here to download the sequence:
Link to NCBI Protein BLAST