Transcript Information: R_Transcript_70338.p1


Annotated TAIR IDAT1G44920.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16983229-16984408 | Reverse length=258
E-Value1.9E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.61201279708
Replicate 213.705918327306
Replicate 316.305143080595
Condition 2: 8 Hour
Replicate 18.7570975332162
Replicate 29.9381697071936
Replicate 310.714492380089
Condition 3: 24 Hour
Replicate 118.732932980939
Replicate 214.780086687088
Replicate 317.935758007319


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70338.p1 GENE.R_Transcript_70338~~R_Transcript_70338.p1 ORF type:complete len:288 (+),score=58.56,DUF3054|PF11255.4|2e-25 R_Transcript_70338:115-978(+)
ATGCAGGCACTAAGCCAAGCATTGTCAAGCAGAGGGCTTTGCAGCAGCCACTGCTGCTGTTGCGGCTACTCCACCACCACCCGCTGCTCCTTATCTTCCACCGCCGCCACCCGTTCTGTTTCCTTTTCTCTCTCCTCATCATCTCCCAAAATTTACCGTCCTGCCACCACTCGTTTCTCCAAACCCGACCCCAAAACTCGTCGTTTCTCTCTCATCTCTGCAAACTCCCAAAAAGGCACCGTTCCCAATCCCACCGCCAATGATAATCAACAGCAACAAGCCCCTTCAACTTCAACCTCAACTTCTTCTTCATCTCCGGTTATTGTGGGCCCAGAGAGTGTTCCTTTGGAAGGTGTTATCCAATTCGACAAGCCCAATTCCTCTTCTCGTATTCAGAAATGGGGGAGAATTGGGTTATTGGCCAGTGGTGATGTTTTGGCTTTGCTCATGTTTGCTGCAATTGGGAGATTTAGTCATGGTTTCCCTGTTTTCGACCCTGAAACCCTGCGTACTGCTGACCCATTGATTGCCGGGTGGTTTTTGAGTGCATACTTTCTAGGAGGTTATTCTGAGGATGGTAGAGGAATGAATGGTTTGTCTAAGGCTATTGTAGCTGCTGCAAAATCCTGGGCCTTAGGTGTACCTATTGGATTGGGCATACGAGCATTATCTTCAGGGCATTTTCCTCCCACCAATTTTATTTTGGTGACGCTGGGAAGCACAGCAGTTCTGCTAATTGGTTGGAGAACAGTGCTATTCCAGCTACTCCCTAGTGACAAGGGCAAGAAAGATGACATGTACAGGCGTGGAAATCCATTTGAACTGTTTGAGGTATCAAAACTTGTTCACGTCTTTGCTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70338.p1 GENE.R_Transcript_70338~~R_Transcript_70338.p1 ORF type:complete len:288 (+),score=58.56,DUF3054|PF11255.4|2e-25 R_Transcript_70338:115-978(+)
MQALSQALSSRGLCSSHCCCCGYSTTTRCSLSSTAATRSVSFSLSSSSPKIYRPATTRFSKPDPKTRRFSLISANSQKGTVPNPTANDNQQQQAPSTSTSTSSSSPVIVGPESVPLEGVIQFDKPNSSSRIQKWGRIGLLASGDVLALLMFAAIGRFSHGFPVFDPETLRTADPLIAGWFLSAYFLGGYSEDGRGMNGLSKAIVAAAKSWALGVPIGLGIRALSSGHFPPTNFILVTLGSTAVLLIGWRTVLFQLLPSDKGKKDDMYRRGNPFELFEVSKLVHVFAD*

Click here to download the sequence:
Link to NCBI Protein BLAST