Transcript Information: R_Transcript_70433.p1


Annotated TAIR IDAT5G12020.1
Annotated Gene Name17.6 kDa class II heat shock protein
Annotated Gene Symbol(s)HSP17.6II
Annotation TypeHomolog
Chromosome Positionchr5:3882409-3882876 | Reverse length=155
E-Value7E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6874668595391
Replicate 23.8175091665996
Replicate 33.007955441919
Condition 2: 8 Hour
Replicate 13.4626475682973
Replicate 23.0492111601617
Replicate 35.5004880667839
Condition 3: 24 Hour
Replicate 111.247006571148
Replicate 210.470678463203
Replicate 38.6224291190808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70433.p1 GENE.R_Transcript_70433~~R_Transcript_70433.p1 ORF type:5prime_partial len:198 (-),score=38.76,HSP20|PF00011.17|5.6e-28 R_Transcript_70433:70-663(-)
GCACTTAAATTCTCTCAGAGGCATATCCACAAACACTTGGTAAGCATAATCAAAACACTCTCAAAACCCACCAAAATTCCGGTCCCAAAGAAGAGAAAGATGGATTTCAGAATGATGGGCTTCGATTCCCCAGTCTTCAACGCACTGAACAACCTCTCCCACATCCTCGACACCGACGACTACAACCCATCAGCCACCGACAACAAGGGAAGCTCCGCCCCATCAAACGCCTACGTGAGGGATGCGCGTGCGATGGCGCGTACAGCGGCGGACGTGAAGGAGTACCCGAACTCGTACCAGTTCATCATCGATATGCCGGGGCTGAAGAGCTCGGACATTAAGGTCCAGATCGAGGATGAAAATGTGTTGGTGATAAGTGGAGAGAGAAAGAGAGAGGAGGAGAAAGATGGGGTTAAGTATTTGAGGATGGAGAGGAGAGTTGGGAAGTTTATGAGGAAGTTTGTGTTGCCAGAGAATGCAAATGTGGAGGGAATTAGTGCTGTTTGTCAAGATGGGGTTTTGACTGTCATTGTTCAGAAGTTGCCACCCCCTGAGCCTAAGAAGGCCAAGAATATTGAGGTTAAGGTTGCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70433.p1 GENE.R_Transcript_70433~~R_Transcript_70433.p1 ORF type:5prime_partial len:198 (-),score=38.76,HSP20|PF00011.17|5.6e-28 R_Transcript_70433:70-663(-)
ALKFSQRHIHKHLVSIIKTLSKPTKIPVPKKRKMDFRMMGFDSPVFNALNNLSHILDTDDYNPSATDNKGSSAPSNAYVRDARAMARTAADVKEYPNSYQFIIDMPGLKSSDIKVQIEDENVLVISGERKREEEKDGVKYLRMERRVGKFMRKFVLPENANVEGISAVCQDGVLTVIVQKLPPPEPKKAKNIEVKVA*

Click here to download the sequence:
Link to NCBI Protein BLAST