Transcript Information: R_Transcript_7048.p1


Annotated TAIR IDAT3G12010.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3821337-3825537 | Forward length=682
E-Value2.8E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.426339064679
Replicate 210.455875777781
Replicate 312.268172215926
Condition 2: 8 Hour
Replicate 18.5125355991094
Replicate 210.955331371856
Replicate 313.692892843835
Condition 3: 24 Hour
Replicate 116.763821653518
Replicate 214.594956554436
Replicate 316.129328688734


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7048.p1 GENE.R_Transcript_7048~~R_Transcript_7048.p1 ORF type:complete len:745 (+),score=121.40,Mic1|PF07035.8|6e+03,Mic1|PF07035.8|2.7e-41 R_Transcript_7048:609-2843(+)
ATGCATAGTGAAGCATCAAGTTCACAGCCCAGCATGGGCTTAAGTGGATCGGGTGCTCTCTCTCATGCTTATATCCAGTATCCACCTTTGACATGCAGCATCCCTGGGTCAAAAGGCTTTTTCTATGACGATGGGAATAAGTTATTGCTGTCTCCAACATCTGATCAGGTGTTCTCGTGGAAAGTTGCACCTTTCGATCCTCATGTCAAACCCACATCTGATTCAATAAGTGAAGGGCCTGTGTTGTCTGTTCGCTACTCTCTAGATGCAAAGATTTTAGCAATTCAACGATCAAGTCATGAGATTCAATTTTGGAACAAGGAGACAGGCAGGACATTCAGTCATAGGTGTCGCCCAGAATCGGAGAGTATACTGGGATTTTTCTGGACAGACTGCCCTACGTGTAATTTTGTACTTGTGAAGACAAGTGGTCTAGACTTGTTCACTTATGATATGGAATCACAAAATCTTCGGTTGGTTGAATCCAAGCGTACTAATGTGAGTTGGTACATTTACACACATGAAAGTCGTCTGGTTCTCCTTGCTTATGGGATGCAGTGCAAGAGTTTTACAGGGTTTCAGCTTTCGTCGATTGGCATCATTCGTTTGCCCAAATTTGATATGCTTATGGCCAAGTCTGAAGCCAATAATAAGCCAGTCCTTAATGCTGAAGATATTCATGTTATCACTGTCTATGGAAGAATATACTGCTTTCAAGTTGATAGAATAGCCATGCTGCTCCATTGCTATAGATTTTACCGTGATGCTGTTGTACAACAGGGATCTTTGCCAATTTATTCAAGCAAGGTAGCTGTGAGTGTGGTTGACAATGTGGTGCTTGTTCATCAAGTTGATGCCAAGGTTGTTCTACTGTATGACCTATATTCCGATTCCAGGGCACCAATATCTGCTCCACTTCCTCTACTTTTGAGGTGTTATCCTAGATCTAGCATTTCATCTTTTACACTCAGTGGCAAAGATGATGGAAGCACAGAGTTAAGACAAACAAATGATCAGGAAACAACTCTTTACAGAGATGGGTGGGCATTCCTCATTCCTGATCTTATATGTGATACCACTGGTGGCCTTCTCTGGAAGGTTCATTTGGACTTAGATGCTATATCTGCCAGTAGCTCGGAAGTACCCTCTGTACTGGAATTCCTGCAGCGACGAAAGTTAGAAGCCAATAAGGCTAAGCAGTTATGTTTGGCACTAGCACGGACCATCATCTTAGAGCGTAGGCCGTTGGGTATTGTTGCTCGGGCCATGGATGTCCTCATTACATCCTACTCACATGCAATTAAGACAGGCAGTTACTTCAAGGGTATGAAAGCTGAGAAGACCCCTGCTTCCACTGGTCAACATGTCCCTAGCACGACATTAACTGCTGATGAATCATCTGACAGAGGAAATTTGAGGAGCGGATCCATTAGAATTGATTCTGCCTCTGCTGTTAGCAATGAACCTCGTGGTCGGTCTTTAACATTTTTAGATTCAGATTCTGAGGAGGAAAAGATTGGTCCAAGTTCAGGCAAAGTGGTAATGGGTGGTGAAATTTCTGGTGACAAGGTTCAGCCATCATCATCCCAATTGCCTGGTCCCGGTAGTGTTCCTTTGGATGTTAATAATGCAGATCAGAATGAATCTCAGATCACAACTGCAGCCATTTCACCCAATGAGGTTTACCGCTATGTGTTTGCCCCAGTAGATGAAGAGATGGCTGGAGACCCTGCTTATTTGGTTGCTGTCATCGTTGAGTTCCTTCGCAGTGCTAATCTTGAGAGAATCAGGATGTATCCTAACCTCTATGTTATGATGGTGCAATTGTTGGCACGTAGCGAAAGATATGCAGAACTGAACTTGTTCATCATCGATAAGATTATCGAACCCTCCAAAGAAGTTGCATTTGAGCTACTAGAATCCGGTTGCCAGCATCTGCCAACCAGGAAGCTGGGTATTGACATGCTTAGGCAGTTATCTTTGCATCATGATTATGTATTGTCGCTGGTCCAGGACGGATATCATCTAGAAGCTCTACGCTATGCCCGTAAGCATAAGGTTGTTAACGTGCGACCATCATTGTTTCTTGAAGCTGCTTATGCCTCAAATGACTCTCAACGTCTAGCCACAGTGCTAAGATTCTTTTCAGACTTCATTCCAGGCTTCAAAAGCACGTCTGATCATGACACATACTGCCACATTCTATGCCAGATGAACGCATCCATAGCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7048.p1 GENE.R_Transcript_7048~~R_Transcript_7048.p1 ORF type:complete len:745 (+),score=121.40,Mic1|PF07035.8|6e+03,Mic1|PF07035.8|2.7e-41 R_Transcript_7048:609-2843(+)
MHSEASSSQPSMGLSGSGALSHAYIQYPPLTCSIPGSKGFFYDDGNKLLLSPTSDQVFSWKVAPFDPHVKPTSDSISEGPVLSVRYSLDAKILAIQRSSHEIQFWNKETGRTFSHRCRPESESILGFFWTDCPTCNFVLVKTSGLDLFTYDMESQNLRLVESKRTNVSWYIYTHESRLVLLAYGMQCKSFTGFQLSSIGIIRLPKFDMLMAKSEANNKPVLNAEDIHVITVYGRIYCFQVDRIAMLLHCYRFYRDAVVQQGSLPIYSSKVAVSVVDNVVLVHQVDAKVVLLYDLYSDSRAPISAPLPLLLRCYPRSSISSFTLSGKDDGSTELRQTNDQETTLYRDGWAFLIPDLICDTTGGLLWKVHLDLDAISASSSEVPSVLEFLQRRKLEANKAKQLCLALARTIILERRPLGIVARAMDVLITSYSHAIKTGSYFKGMKAEKTPASTGQHVPSTTLTADESSDRGNLRSGSIRIDSASAVSNEPRGRSLTFLDSDSEEEKIGPSSGKVVMGGEISGDKVQPSSSQLPGPGSVPLDVNNADQNESQITTAAISPNEVYRYVFAPVDEEMAGDPAYLVAVIVEFLRSANLERIRMYPNLYVMMVQLLARSERYAELNLFIIDKIIEPSKEVAFELLESGCQHLPTRKLGIDMLRQLSLHHDYVLSLVQDGYHLEALRYARKHKVVNVRPSLFLEAAYASNDSQRLATVLRFFSDFIPGFKSTSDHDTYCHILCQMNASIAA*

Click here to download the sequence:
Link to NCBI Protein BLAST