Transcript Information: R_Transcript_70511.p1


Annotated TAIR IDAT3G14440.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 3
Annotated Gene Symbol(s)NCED3, ATNCED3, STO1, SIS7
Annotation TypeOrtholog
Chromosome Positionchr3:4831678-4833477 | Reverse length=599
E-Value2.7E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7214174558922
Replicate 20.61452586584287
Replicate 30.81942801156968
Condition 2: 8 Hour
Replicate 12.9064522620307
Replicate 26.2537750840389
Replicate 39.7103738115566
Condition 3: 24 Hour
Replicate 17.6526024092347
Replicate 23.693807586552
Replicate 38.9686204570701


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70511.p1 GENE.R_Transcript_70511~~R_Transcript_70511.p1 ORF type:complete len:615 (+),score=44.53,RPE65|PF03055.11|2.2e-99 R_Transcript_70511:204-2048(+)
ATGATGGCTTATGCAGGCACAGCAACAAATAGTAGTGCAAATATATGGGTAAAGCCGCAAATTGGCGGTCATCAGTCATTAGTAGTAGACATGGGCTCTGTCAATTGGCCGAATAGAAAACCCAACAACATTAATTGCTCTCTCCAATTGCCTTTGCTTGACTCTACTAAGAAATCATCAACAACACAACCAAGAATAGCGACAACACCATCGAAAAAATCTACTAAAACTACCATTATTTCTCCTCCTAAAACAGAGACAAAGAACCCGCAAATATGGAACCCAATCCAGAAGGCAGCAGCTGCTGCCTTGGATATGGTAGAAAAAGCCTTGAACATCCAAGAGAGCAAAACCCAGTTGCCTAAAACCGCCGACCCGAGAGTCCAGATCGCCGGAAATTTCTCTCCGGTGCCGGAGCAGCCCGTCAAGCGGAACCTCCCGGTGTCCGGGAAGATCCCGGAGTCTGTCCGAGGTGTGTACGTCAGGAACGGGGCGAACCCGCTATATGAGCCAGTGGCGGGGCACCACTTCTTCGACGGCGACGGAATGATCCACGCCGTAGAATTCCACCAGGACGGGTCCGCAAGCTATGCCTGCCGGTTCACGGAGACCAACCGCCTTGTCCAAGAGCGGACCTTGGGGCGGCCTATATTCCCCAAGGCCATTGGAGAGCTACATGGACACTCGGGCATAGCTCGCCTACTTCTATTCTACTCCAGGGCCGTTTTTGGTCTGCTTGATCACTCCAATGGAATTGGAGTGGCTAACGCAGGCCTTGTCTATTTCAACAATAGATTATTAGCTATGTCCGAAGATGACTTGCCTTACCAAGTCCGGGTCACCCCAACTGGGGACTTGAAAACTGTTGGCCGGTACGACTTCTCGGGTCAGCTCAAGTCAACCATGATTGCCCACCCGAAAGTCGACCCGGTTTCCGGGGAGATGTTTGCTTTAAGCTACGACGTCGTCAAGAAGCCGTACTTGAAATATTTCTGGTTCAATGCCGATGGTACCAAGTCAAAAGACGTCGAGATCAACCTCGAGTCTCCAACAATGATGCATGATTTCGCCATCACTGAGAAATCCGTCATAATTCCCGACAGTCAGGTCGTGTTCAAGCTCCAGGAGATGATTCGAGGCGGCTCGCCTGTCGTTTTCGACAAAGATAAGGTCTCCAGGTTCGGAATTCTACCAAAACATGCTGAAAGTTCGGATGAAATCCAATGGATTGACGTTCCAGATAGCTTCTGCTTTCACCTCTGGAACGCCTGGGAGGAGCCTGAAACCGATGAGGTGATCGTAATTGGGTCCTGCATGACTCCACCTGACTCCATCTTCAACGAATGTGACGAGACCCTCTCAAGTGTCTTATCTGAGATTCGGTTGAACCGGAAGACCGGCAAGTCAACCTGCCGGGAAATTCTATCCCAGTCCGACCAGATGAACCTCGAGGCCGGGATGGTGAACCGGAACAAATTAGGGGGGAAAACCCAGTTCGCTTACCTCGCCATTGCTGAGCCGTGGCCTAAAGTGTCAGGCTTTGCAAAGGTGGACCTCTTCACGGGTCAGGTGAAAAAATTCACCTACGGGGAGGAAAAATACGGTGGCGAACCATTTTTCCTCCCTAAGGACCCACAGCCATCATCAGAGTCCGAGATTAAAGAGGATGAGGGTTACATTTTAGCCTATGTTCACGATGAGAAGAACTGGAAATCAGAGCTCCAAATTGTGGATTCCTCAACAGTAGAGCTTGTGGCCACAGTTGAATTACCATCAAGGGTTCCTTATGGATTTCACGGCACTTTCATCAGTGCTAAGGATTTAAAAAGGCAAGCATATTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70511.p1 GENE.R_Transcript_70511~~R_Transcript_70511.p1 ORF type:complete len:615 (+),score=44.53,RPE65|PF03055.11|2.2e-99 R_Transcript_70511:204-2048(+)
MMAYAGTATNSSANIWVKPQIGGHQSLVVDMGSVNWPNRKPNNINCSLQLPLLDSTKKSSTTQPRIATTPSKKSTKTTIISPPKTETKNPQIWNPIQKAAAAALDMVEKALNIQESKTQLPKTADPRVQIAGNFSPVPEQPVKRNLPVSGKIPESVRGVYVRNGANPLYEPVAGHHFFDGDGMIHAVEFHQDGSASYACRFTETNRLVQERTLGRPIFPKAIGELHGHSGIARLLLFYSRAVFGLLDHSNGIGVANAGLVYFNNRLLAMSEDDLPYQVRVTPTGDLKTVGRYDFSGQLKSTMIAHPKVDPVSGEMFALSYDVVKKPYLKYFWFNADGTKSKDVEINLESPTMMHDFAITEKSVIIPDSQVVFKLQEMIRGGSPVVFDKDKVSRFGILPKHAESSDEIQWIDVPDSFCFHLWNAWEEPETDEVIVIGSCMTPPDSIFNECDETLSSVLSEIRLNRKTGKSTCREILSQSDQMNLEAGMVNRNKLGGKTQFAYLAIAEPWPKVSGFAKVDLFTGQVKKFTYGEEKYGGEPFFLPKDPQPSSESEIKEDEGYILAYVHDEKNWKSELQIVDSSTVELVATVELPSRVPYGFHGTFISAKDLKRQAYY*

Click here to download the sequence:
Link to NCBI Protein BLAST