Transcript Information: R_Transcript_70515.p1


Annotated TAIR IDAT3G14440.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 3
Annotated Gene Symbol(s)NCED3, ATNCED3, STO1, SIS7
Annotation TypeOrtholog
Chromosome Positionchr3:4831678-4833477 | Reverse length=599
E-Value1E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49001237462332
Replicate 20.42274430368385
Replicate 30.30747298786782
Condition 2: 8 Hour
Replicate 11.3146773126038
Replicate 21.8008763898941
Replicate 34.8729156027885
Condition 3: 24 Hour
Replicate 14.9305357804465
Replicate 21.1841749739907
Replicate 36.3165859163529


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70515.p1 GENE.R_Transcript_70515~~R_Transcript_70515.p1 ORF type:3prime_partial len:149 (-),score=7.49,RPE65|PF03055.11|1.8e-17 R_Transcript_70515:2-445(-)
ATGACGGATTTCTCAGTGATGATTCGAGGCGGCTCGCCTGTCGTTTTCGACAAAGATAAGGTCTCCAGGTTCGGAATTCTACCAAAACATGCTGAAAGTTCGGATGAAATCCAATGGATTGACGTTCCAGATAGCTTCTGCTTTCACCTCTGGAACGCCTGGGAGGAGCCTGAAACCGATGAGGTGATCGTAATTGGGTCCTGCATGACTCCACCTGACTCCATCTTCAACGAATGTGACGAGACCCTCTCAAGTGTCTTATCTGAGATTCGGTTGAACCGGAAGACCGGCAAGTCCATCCGCCGGGAAATTCTATCCCAGTCCGACCAGATGAACCTCGAGGCCGGGATGGTGAACCGGAACAAATTAGGGAGGAAAACCCGTTTCGCTTACCTCGCCATTGCTGAGCCGTGGCCCAAAGTGTCAGGCTTTGCTAAGGTGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70515.p1 GENE.R_Transcript_70515~~R_Transcript_70515.p1 ORF type:3prime_partial len:149 (-),score=7.49,RPE65|PF03055.11|1.8e-17 R_Transcript_70515:2-445(-)
MTDFSVMIRGGSPVVFDKDKVSRFGILPKHAESSDEIQWIDVPDSFCFHLWNAWEEPETDEVIVIGSCMTPPDSIFNECDETLSSVLSEIRLNRKTGKSIRREILSQSDQMNLEAGMVNRNKLGRKTRFAYLAIAEPWPKVSGFAKVD

Click here to download the sequence:
Link to NCBI Protein BLAST