Transcript Information: R_Transcript_70684.p1


Annotated TAIR IDAT5G19300.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6495593-6497987 | Forward length=398
E-Value2.3E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.34707178175989
Condition 2: 8 Hour
Replicate 10.74199590749228
Replicate 20.56466873336327
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 21.1139019641706
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70684.p1 GENE.R_Transcript_70684~~R_Transcript_70684.p1 ORF type:complete len:198 (+),score=28.87,Methyltrn_RNA_3|PF02598.13|7.6e-56 R_Transcript_70684:503-1096(+)
ATGGATGATCCAACTGTATCAAGTAAAGGGTGTAGTGATGAGGATGAAAGCAGTGCAGCATTTTTTATAAGAATATTGCGGTACCTTGAGACACCTCAGTATCTAAGAAAGAGCCTATTTCCAAGGCATAGTAGCTTAAGATTTGTGGGCATGTTACCTCCCCTTGATGCGCCTCATCATCTTCGCAAGCATGAATGGGGATCTTATAGAGAAGGTGTAACTCTGAGAGAACGAACTGCAAACCCTCTTGGTACATTTGTAGACGTGGGCTTAAGCAAGAATGTTGTGGTTGATCAAGTGCTTGACCCAGGAATAAGGGTTACTGTAGCCATGGGAACTGACCGTAATCTGAATCCAGGGGTATTACGTCAGGTTGTCCCATCTACTACACCTAAGAAAGAAGAGGACACATACTGGGGTTATAAAGTAAGATATGCTCCAAACTTGAGCTCTGTGATTGAGGGATGCCCATATGAGGGTGGTTATGACTATGTGATTGGTACATCAGAGCACGGCCAGGTTGTCAAGTCGTCCAAGCTTTCTATACCAACTTTCAGGGAAAGAATGCACGCGATGTGTTTAATTTGTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70684.p1 GENE.R_Transcript_70684~~R_Transcript_70684.p1 ORF type:complete len:198 (+),score=28.87,Methyltrn_RNA_3|PF02598.13|7.6e-56 R_Transcript_70684:503-1096(+)
MDDPTVSSKGCSDEDESSAAFFIRILRYLETPQYLRKSLFPRHSSLRFVGMLPPLDAPHHLRKHEWGSYREGVTLRERTANPLGTFVDVGLSKNVVVDQVLDPGIRVTVAMGTDRNLNPGVLRQVVPSTTPKKEEDTYWGYKVRYAPNLSSVIEGCPYEGGYDYVIGTSEHGQVVKSSKLSIPTFRERMHAMCLICI*

Click here to download the sequence:
Link to NCBI Protein BLAST