Transcript Information: R_Transcript_70734.p1


Annotated TAIR IDAT3G27700.1
Annotated Gene Namezinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10257681-10261330 | Reverse length=908
E-Value3E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.926750835876
Replicate 27.3341709654375
Replicate 39.3676115409186
Condition 2: 8 Hour
Replicate 17.9272661810038
Replicate 210.620823536921
Replicate 313.202928704712
Condition 3: 24 Hour
Replicate 112.126807651695
Replicate 29.7475318845469
Replicate 311.794652365889


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70734.p1 GENE.R_Transcript_70734~~R_Transcript_70734.p1 ORF type:complete len:939 (+),score=244.61,RRM_6|PF14259.2|6.2e-08,RRM_6|PF14259.2|0.32,RRM_1|PF00076.18|1.3e-06,RRM_1|PF00076.18|0.41,RRM_5|PF13893.2|4.2e-06,RRM_5|PF13893.2|0.45,Nup35_RRM_2|PF14605.2|9.7e-06,Nup35_RRM_2|PF14605.2|0.39 R_Transcript_70734:82-2898(+)
ATGGAGATGGAGCTGAAGAATTCATCCCCGAAGTCCGGTGTTTCTCCTCCAAATTGTGCCAGTGATCCAGAAGAGAAAGAAATAAGTGATGATGATGATGATGATCGCAATCATAAGCATCGTAGACGGGAAACGAGGTCTCAGTCCTTGGAGAGAGATCCATTGGACCAAGCTTTGACACAGCCCTACCGAAAGCGCAACAGGCCGTTTGAAAATGGCGATCCTCAGTCACACTTCAACTTTGACAGGGACTTCTCAAAGTTTGAAAAGAGACGCCCCGGAGTGAATTTCTCCCGATTTGCTGGTGATCATGGTTCTGGCAGAGGAAGAGGTAGAGATTACCAACGGGATTTACGGTTTAGTTCTGTTGATGTCGCTTCACAAATGGCTCACCCAGGTCCTATTCCCTCTGCCATGTTCTCAGGAAGAGGACTGTCTAATGTTTCAAATGCTCCGAATGCATCTTGGAACGGTTTTGGACTAATCCCTGCCATTCCAAATGGGCCAATGGATGCAATCAATCCTCTTGGACTGCCAGGAATCCTCAGACCACAGCTCAATCCTTCATTGAACATGGGTATTCAGCGTCAACGTTGTAGAGACTTTGAGGAACGTGGATTTTGTTTGAGAGGTGATATGTGCCCAATGGAGCATGGAGTCAATCGTATAGTTGTTGAAGATGTACAGAGCTTATCACAGTTTAACCTCCCTGTATCACTCCCAAGTGCACATCTATTGGGAACATCACCTGGAAGTGGATTTGTGCCACCAGTTAGTGTTTCTCCAAGTACGTTGATCAATAGTAGAGGTCTACATAGTAAAACAGGGAAGTCTGCTGTGGATGATGGTGCATTGAATCTGGATGGGGCATTTTCTGGTGCTGTTAGTGCTACTGGAGCAGATGTTTATGACCCTGATCAACCCTTATGGAACAATGATGGCAATGAACTGCAACCTCCCAATTTTGTTGAATCGGAGTCATTGATGGATGCTGAGTTATCTGATCGTCTAGTCCGCAACAGTGGAGCAGCTATTGGTTCACAAAGTACTAGTTCATCTGTCTGGGGAAGACTTAATAATTCGAAGAATAAATTAGAACTGAAAGAGAAATTTGACACTAGGCCAAAGCCCACAGAATTTTCAGAGGGCAGATCAAAAGAGATTCGTGAAGCATCAGGTGGCACTCAATCAATGTCTCATCTTGGAAAGCACAACAATGTGTCGACATTCAGCTCAAAAGCTGTTGGTGCGAATTCCAAGCTGCAAAATGATATAGGGTCTAATGTTAAGAAGCCAACGCAAAAGGCTCAACGCACTTTATTTGTCAACTGCATCCCCTTGAAAGACAACAAGAAAGAGAACCTTCTCTCTCATTTTAGAAAATTTGGAGAAGTGATTGATATTTATATTCCAGCAAACACTGAACGAGCTTTTGTGCAATTCTCAAAAAGGGAAGAGGCAGAGAGAGCTCTTAAGGCGCCTGATGCTGTGATGGGTAGTCGATTCATCAAGCTGTGGTGGGCAAATAGAGACAGCATAGCTGATGAGGGTATGAGCAGTGGCAACAATTTGTCTGTAACTCCCCGTAACTTACCAGCTGCATCGAGCTCACCTCATCCAGCTGTTGTTAATAAAGGAAAAGATAACCTGCAAACAGCTTCCAAATTGGTTATGCCTAAAACATCTGACAACCTTGTGACTGCTGGAAGTGACTCTAGACCTGTGACACCAAATGGTCCCAAGGCACCACTACCTGTGCAGAAGAAGGAGAGCTTGGAGCTTTTGAAGGAGGAGCTTCGTAAAAAGCAGGAGGAGCTAGAACAGAAGCGGAATGAATTCCGCAGACAGTTGGATAAACTTGCGAAACAAACTTCGGGAGTGAAGAGTGATGTACCAGCTGGACAAGCTACAGAGAAACAAAAGTTGGAAACATTGTCTGAAGCCACAAATGTTGGAAAGTCTGTTGATGCTGCTGTTTCTGGGTCATCATCGCAGGCTGAAATAGTGGCGAACAAACTATCAAATGTAGAGAATTTAGCATCTCAGAGATGCATGACACGTTCAGCTGCTGACCCTCAGAGCTTGAAGCCGACAGTTCGTCCAATAGCAGCTGCTGGAACTCCATTTCACATGAATAGATATAAATTGGATAATCGGCCCAAAACGTTTAGAATCTGTGCACCTTTACCAGTGGATTTGGCAAATATTGCTGCCTTGAGGGATCACTTTTCATCATATGGTGAGATATCTAATCTCGAGATTGAAGAGCTGGGTGAGGAAGATAGCCCTGATACCTGCAGTAATCCTGAGATGATGAGAAATTGCTCTGCGCGTGTAAGTTTTGCAACTCGCCATTCAGCTGAAAAGGCATTTGTGAATGGTAAGTCTTGGCAGGGACGCAATTTGCAATTCATATGGATAACTCCCAGTATTCCCAGTAGTAGCCGAAGTAGTGGAGAGAGCTCTTCTGCTCTGAGAGGTGCTTTCAATGCTGAAGTTCAGTCTGTGGAGAAAACAAAACATGATAATCCTCAGCATGTGTCTGGTCTCTCAGAAAGTAATTCATCTTTTCATAAATCATTGAATGAACTTTCTGAGGATAGCTCCAGGTCTGGTGGCAGAGGGAATTCTCCAGTTGCTATTGAAGATTCAGTTTTTGAGGCTCATTCTCCAGATAAATCAGCAAGTTATATTCCTTTGGAACACGATGAAGATGAAAATAGGGAGTCTGAAGTACAAGAAGAAATTGTTGGTGACGATATCCAGTCAGATGAAGATATGGAAGCCAGTCGGACTCTACTGTCCGGGGAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70734.p1 GENE.R_Transcript_70734~~R_Transcript_70734.p1 ORF type:complete len:939 (+),score=244.61,RRM_6|PF14259.2|6.2e-08,RRM_6|PF14259.2|0.32,RRM_1|PF00076.18|1.3e-06,RRM_1|PF00076.18|0.41,RRM_5|PF13893.2|4.2e-06,RRM_5|PF13893.2|0.45,Nup35_RRM_2|PF14605.2|9.7e-06,Nup35_RRM_2|PF14605.2|0.39 R_Transcript_70734:82-2898(+)
MEMELKNSSPKSGVSPPNCASDPEEKEISDDDDDDRNHKHRRRETRSQSLERDPLDQALTQPYRKRNRPFENGDPQSHFNFDRDFSKFEKRRPGVNFSRFAGDHGSGRGRGRDYQRDLRFSSVDVASQMAHPGPIPSAMFSGRGLSNVSNAPNASWNGFGLIPAIPNGPMDAINPLGLPGILRPQLNPSLNMGIQRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTSPGSGFVPPVSVSPSTLINSRGLHSKTGKSAVDDGALNLDGAFSGAVSATGADVYDPDQPLWNNDGNELQPPNFVESESLMDAELSDRLVRNSGAAIGSQSTSSSVWGRLNNSKNKLELKEKFDTRPKPTEFSEGRSKEIREASGGTQSMSHLGKHNNVSTFSSKAVGANSKLQNDIGSNVKKPTQKAQRTLFVNCIPLKDNKKENLLSHFRKFGEVIDIYIPANTERAFVQFSKREEAERALKAPDAVMGSRFIKLWWANRDSIADEGMSSGNNLSVTPRNLPAASSSPHPAVVNKGKDNLQTASKLVMPKTSDNLVTAGSDSRPVTPNGPKAPLPVQKKESLELLKEELRKKQEELEQKRNEFRRQLDKLAKQTSGVKSDVPAGQATEKQKLETLSEATNVGKSVDAAVSGSSSQAEIVANKLSNVENLASQRCMTRSAADPQSLKPTVRPIAAAGTPFHMNRYKLDNRPKTFRICAPLPVDLANIAALRDHFSSYGEISNLEIEELGEEDSPDTCSNPEMMRNCSARVSFATRHSAEKAFVNGKSWQGRNLQFIWITPSIPSSSRSSGESSSALRGAFNAEVQSVEKTKHDNPQHVSGLSESNSSFHKSLNELSEDSSRSGGRGNSPVAIEDSVFEAHSPDKSASYIPLEHDEDENRESEVQEEIVGDDIQSDEDMEASRTLLSGER*

Click here to download the sequence:
Link to NCBI Protein BLAST