Transcript Information: R_Transcript_70794.p1


Annotated TAIR IDAT3G42670.1
Annotated Gene Namechromatin remodeling 38
Annotated Gene Symbol(s)CHR38, CLSY
Annotation TypeOrtholog
Chromosome Positionchr3:14755906-14760085 | Reverse length=1256
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.082848192053
Replicate 26.3334648710839
Replicate 37.8527588465852
Condition 2: 8 Hour
Replicate 18.9805941797531
Replicate 27.5484713401008
Replicate 311.249650893473
Condition 3: 24 Hour
Replicate 113.128566408657
Replicate 28.6669243394858
Replicate 313.679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70794.p1 GENE.R_Transcript_70794~~R_Transcript_70794.p1 ORF type:complete len:1336 (+),score=258.50,SNF2_N|PF00176.19|1.8e-19,Helicase_C|PF00271.27|5e-14,ResIII|PF04851.11|2.1e+03,ResIII|PF04851.11|2.6e+03,ResIII|PF04851.11|4.3e-08,ResIII|PF04851.11|8.2e+03 R_Transcript_70794:628-4635(+)
ATGAGGAAAAGAGGTCTTCACCAAGCGTTGCATCCATTTGATGACCAGCCTTTTGAGGTGTTTTATCTTGGTTCATGGAAAATTGTGGAGCGTTTAAGAATCAGTGATGGAACTATAACTTTTAATTTTCCAGACCTTGGGTATCAATTTGAGCAAAAGCATTTCCTTCCCACCCTAAGGCTACAACCAAGAAGGGCGACTTTAACCGACTGTACCTGCGTACTAAGACCTGGTGCTGATGTTTCTGTGCTTTCAATATCCGAATGTTCAGAAAATTCATCTGAAGAATCCTGCACTGGATGGTACGATGCTAGGATAACTTCGATTGAGAGGATTCCACATGGATCAGGATGCAACTGCAAGTTTTACATCAAATTCTTCTACATCAGCGATGATGCAGGCACAGATAGAAGAAAACTAAGCAAGGATGTTGAAGCCGTGGGGATTGATAAAATATCTGTTCTTCAAATTCTTCAGCAAAAGCCTTCCGAAAATACACACTATAGGTGGAACCTAGCCGAGGACTGCACTTCAGCCTCAAGGAATAAGTTGTTTCTTGGGAAGTTTGCTTCTGATATATCTTGGCTTCTCGTTGCATCTGTTCAAAAGCAGATTGTCTTTGATGTAAGATCAATAGACCAGAAGCTTGTCTACCAAATATTAGACGGGAGCTTTAACACATACTCTACGTCTGTTAATCTAAGTGCTGTAAATTTCAAGATTGATGGTGGGATTACTTCCTCTGTGATTTTTCCATTTGTTCCTGTTGACAATGTCAAACCAACTGCTCTCCAGGAAGTAAAAGAGGAAGTGGATCCAATCACCTGCTACGAGGTTATGGACTTGAGGCGATCAAAGCGCCGGAATGTGCAACCTGAGCGCTACTTGGGCGACATCGGTCTTGAGGAAACGGATACTACTGCACTCAGAATTGGGTACAAGAGATGGGATAAGGACGATGAACTTGCAATTGTGCTCGCAGATGGTGATGACATGAGTGCGGCCCTACTAGAAGAATCTGAAGAGAACTTTGAACGTGCTGTTGAAATGTATTCTGGGGATACTTATCTTGTTTCGAAAGTTGGGGTTGAGGGGAAGAAAGAGAAAGCTGGAAAAGACGTACAATTAGACGAAGGAAGTGAGGGAAGAAATGGCCAAGGTGAAAAAGAGAGCAAGCGCAAATATGTCCAAAGAGAGAAAGAGAGTACGTTCAGAAATGTTCAAGGAGAGAAAGAGACTAAGGTCAGAAGTGCTCAAACTGAGAAGGAGAAAAAGGTAAGAAATTTCCAAAGAGAGAAAGAGAGCAAGGTTGGAAACAATAGGGGAAAAGGGAGTGCGGCTGAACTTGCTATTATCCCAGTAACAGAGGAAGGGAATGTGATGCCAAGGGAACAAAGTCATCTCCTTGCGGAGATACGTCCGAATCCTCTCAATATAGATGACGATAACGTGCCCTTAAAGTACTACCGCAGGAGATTTAGAACACCAAGAACAGCACGCACAAAGAAGATCTCGGAATTGGATGATTTTGGTGAAGAACATAGATGGGGGGGAAGGGGTTCAAACAACAGATCACAAACAAAGAATTACCATCATATGTCTTCTTCTAGGAGTAACAAGTATTCTGAGGATCCTTCCTCGAGAAGTAAAACGAAAACCTTGGATATTGGTGTTTACAAGGATCTAATATCAACTTACATGAAGAACATACAATTGACAATAGAAAATAAGCAGCCGCTTCCTGCTGATGCATGGAAAAATCTTCAAGGAGCATCATCTATGTATGAAAAGAAGGCTGCCGAGGAAGCTTCACAGCCAGAGGAAGAGGAAGAAGAGTCCGAGACTGAAATGTTGTTTAGAGAAATGGAACTCTGTTTGGCGGCAGCATATTATCTTGAAGAGGAGAATTCAAAGGCTGAAGGCGATCCAATTCAGAACTTCTTCAAAGATTCTTGTCAGCACATCTACATCGTAGATGATGAGATCGGGATTCTGTGCAAATTGTGTGGATATGTAGCAACTGAAATCAGAGATGTCGCACCCCCATTTGTGCAAACAACAGGAGGACCTATAAAACATGACCGAGGTGAAAAAATTGAGAAGGATGATACGGAGCATAAGTTGCTTAGTGAGGCATGCGCTGATCTTGTCTACAACCCTTCTTCTACTGATGTTCCCTGGGCCGAATCAAATGACAATGTTTGGGGCCTAATTCCGAGTATCAGGAAAAAATTACACGACCATCAAAAGAAAGCTTTTGAGTTCCTGTGGAGAAATCTTGCAGGGTCCTTGATACCTTCAGAAATGGAACCATCCAGCAAGAAAGTGGGTGGTTGTGTAATATCTCATTCTCCTGGCGCTGGAAAAACCTTTCTTATCATTGCATTCTTGGTAAGTTACTTGAAGCTATTCCCAGGAAAGCGGCCTTTGGTTCTTGCACCAAAGACAACACTTTATACATGGTACAAGGAAATTATCAAGTGGGAATTCCCTGTCCCCGTTTATCAAATCCATGGACGTAGAACCTACAGAGATAGAATCTACATGCAGAAAATTGGGACCGCCTCATCAACTGTGGTACCAAATGGAGATATCATGCATGTCCTTGACTGCTTGGAGAAAATACAGAAGTGGCATGCGCACCCAAGTGTTCTTCTCATGGGTTACACCTCATTTCTATCACTGATGCGAGAAGATTCAAAATATGCCCATCGTAGGTACATGGGTCAGATTTTGCGGGAAAGTCCAGGGATTCTCATACTAGATGAAGGGCACAACCCAAGAAGCACGAAGTCAAGGCTGAGGAAAGCTTTGATGAGAGTTGAGACAGAATTCAGGATTTTGCTGTCAGGTACTTTGTTTCAGAACAACTTCGGTGAATATTTCAATACCCTTTGCTTAGCAAGGCCAAAGTTTGTCAATGAGGTCTTGCGGGTGCTAGATCCAAAGTACAAAAAGAAAATAAAGGGGCAGAAGAAAACAAGGACTTCCATAGAAAACAGGGCAAGAAAGGTTTTCATGGACATAATCGCAAGGAAAATCAACTCTAACATCCCAGACGAGAGAGTCGATGGTCTCAACATGTTGAAGAACATGACAAACAAATTCATTGATGTATACGAAGGTGGCGGCGCCGAGAATCTCCCTGGCCTGCAGAGTTATACCCTAATGATGAAACCTACGTCCTTGCAGCACGAAATCCTTGTCAGACTACATCAACACATGAATGTCGCTAGAGGATTCCCCTTGGAACTCGAGCTCATGATTACCCTTGGATCTATCCATCCCTGGCTGATTAAAACAGCAGTTTGTGCTAACAAGTTTCTAAGCTTAGAGGAGCTCCATAGCCTTGATGAGTTCAAGCTCGACCCCACAAAAGGGTCGAAGGTGAAATTCGTACTTGGCTTAGTTCAGCGATCTATAATAAGAAGAGAGAAGGTATTGATCTTTTGTCATAACATAGCACCCATCAATCTCTTTCTCGAGCTTTTCGAGAGGATATATGGGTGGAGGAAGGGCCATGATGTTCTGGTCCTTCAGGGGGATCTGGAACTCTTTGAAAGGGGAAGGGTGATGGATAAATTCGAGGAACGTGGAGGGCCATCAAAGGTTTTACTGGCTTCAATCAATGCTTGTGCTGAAGGTATCACTTTGACCGCAGCTTCAAGGGTGGTTTTATTGGATTCCGAGTGGAACCCATCAAAGCAAAAACAGGCCATTGCTCGAGCTTTCCGTCCTGGTCAAGAGAAGGTAGTCTATGTGTATCAGCTCTTGGCAACTGGCACATTGGAGGAAGACAAGTATGGTAGGACGACGTGGAAAGAATGGGTCTCCTGCATGATATTCAGTGAGGAGCTCGTAGATGACCCTTCAAAATGGCAAGCAAATAAGATTGAAGATGCTTTGCTGAGGGAGATTATAGAGGAGGACCATGCTAAATCTTTCCATATGATTATGAAGAACGAGAAGGCTTCATATGAAAACCCTTTGAAGGTGATCAATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70794.p1 GENE.R_Transcript_70794~~R_Transcript_70794.p1 ORF type:complete len:1336 (+),score=258.50,SNF2_N|PF00176.19|1.8e-19,Helicase_C|PF00271.27|5e-14,ResIII|PF04851.11|2.1e+03,ResIII|PF04851.11|2.6e+03,ResIII|PF04851.11|4.3e-08,ResIII|PF04851.11|8.2e+03 R_Transcript_70794:628-4635(+)
MRKRGLHQALHPFDDQPFEVFYLGSWKIVERLRISDGTITFNFPDLGYQFEQKHFLPTLRLQPRRATLTDCTCVLRPGADVSVLSISECSENSSEESCTGWYDARITSIERIPHGSGCNCKFYIKFFYISDDAGTDRRKLSKDVEAVGIDKISVLQILQQKPSENTHYRWNLAEDCTSASRNKLFLGKFASDISWLLVASVQKQIVFDVRSIDQKLVYQILDGSFNTYSTSVNLSAVNFKIDGGITSSVIFPFVPVDNVKPTALQEVKEEVDPITCYEVMDLRRSKRRNVQPERYLGDIGLEETDTTALRIGYKRWDKDDELAIVLADGDDMSAALLEESEENFERAVEMYSGDTYLVSKVGVEGKKEKAGKDVQLDEGSEGRNGQGEKESKRKYVQREKESTFRNVQGEKETKVRSAQTEKEKKVRNFQREKESKVGNNRGKGSAAELAIIPVTEEGNVMPREQSHLLAEIRPNPLNIDDDNVPLKYYRRRFRTPRTARTKKISELDDFGEEHRWGGRGSNNRSQTKNYHHMSSSRSNKYSEDPSSRSKTKTLDIGVYKDLISTYMKNIQLTIENKQPLPADAWKNLQGASSMYEKKAAEEASQPEEEEEESETEMLFREMELCLAAAYYLEEENSKAEGDPIQNFFKDSCQHIYIVDDEIGILCKLCGYVATEIRDVAPPFVQTTGGPIKHDRGEKIEKDDTEHKLLSEACADLVYNPSSTDVPWAESNDNVWGLIPSIRKKLHDHQKKAFEFLWRNLAGSLIPSEMEPSSKKVGGCVISHSPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEIIKWEFPVPVYQIHGRRTYRDRIYMQKIGTASSTVVPNGDIMHVLDCLEKIQKWHAHPSVLLMGYTSFLSLMREDSKYAHRRYMGQILRESPGILILDEGHNPRSTKSRLRKALMRVETEFRILLSGTLFQNNFGEYFNTLCLARPKFVNEVLRVLDPKYKKKIKGQKKTRTSIENRARKVFMDIIARKINSNIPDERVDGLNMLKNMTNKFIDVYEGGGAENLPGLQSYTLMMKPTSLQHEILVRLHQHMNVARGFPLELELMITLGSIHPWLIKTAVCANKFLSLEELHSLDEFKLDPTKGSKVKFVLGLVQRSIIRREKVLIFCHNIAPINLFLELFERIYGWRKGHDVLVLQGDLELFERGRVMDKFEERGGPSKVLLASINACAEGITLTAASRVVLLDSEWNPSKQKQAIARAFRPGQEKVVYVYQLLATGTLEEDKYGRTTWKEWVSCMIFSEELVDDPSKWQANKIEDALLREIIEEDHAKSFHMIMKNEKASYENPLKVINE*

Click here to download the sequence:
Link to NCBI Protein BLAST