Transcript Information: R_Transcript_70808.p1


Annotated TAIR IDAT1G26780.2
Annotated Gene Namemyb domain protein 117
Annotated Gene Symbol(s)MYB117, AtMYB117, LOF1
Annotation TypeOrtholog
Chromosome Positionchr1:9271033-9272463 | Forward length=359
E-Value1.1E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47720159358742
Replicate 20.68615360837575
Replicate 30.74858619595269
Condition 2: 8 Hour
Replicate 13.3608049927591
Replicate 23.7998884174564
Replicate 33.4405013594198
Condition 3: 24 Hour
Replicate 11.0503571934244
Replicate 21.297368170034
Replicate 31.3590404870949


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70808.p1 GENE.R_Transcript_70808~~R_Transcript_70808.p1 ORF type:5prime_partial len:306 (+),score=71.84,Myb_DNA-binding|PF00249.27|9.9e-16,Myb_DNA-binding|PF00249.27|1.5e-15,Myb_DNA-bind_6|PF13921.2|6.1e-14,Myb_DNA-bind_6|PF13921.2|1.5e-08 R_Transcript_70808:3-920(+)
CATCAGAATTTTAGTGGTGAGAATATTATTACTACTACTACTACTAGTAGCAGTAAAGTAGTGGGTTGTTCTAAAGAATCCAACAACAGGGTGTGTGCTAGAGGCCATTGGAGACCTGCTGAAGATAGTAAGCTCAAGGAACTTGTTGCTATTTATGGCCCTCAGAATTGGAATCTCATTGCTGAGAAATTAGAAGGAAGATCTGGTAAAAGTTGCAGATTAAGGTGGTTCAACCAACTAGACCCAAGAATAAACAGGAGGGCATTCACAGAAGAAGAAGAGGAGAGATTAATGCAAGCACATAGAGTGTATGGAAACAAATGGGCTTTGATAGCAAGGCTTTTTCCAGGTAGAACTGACAATGCTGTTAAGAATCACTGGCATGTTATTATGGCTAGAAAGTATAGAGAACAATCTAGCGCTTACAGAAGGAGAAGAACTTCTACTCTCATGCCTTCTCATCCTCATCCTTTCGATCTTCGAAGATCATCTTCGTCTTCATCAATGGAGGAAGATCATAGTAATAGCAATCAACAATGTTCTTCCTTCTACTATGGGTACCCTAATCCAAGCTCTACTGGCAATGGATTTTGTGCTCAGCCAACTCCTTTGGATTCCTTCTCAGGTCCCAACAGCCAGAACATGGTGAGCATGTTGAGTTCAAGCAACTGTTTGGATAGGCCAATTCCAATGCCAATACAAATGCAACCTCAACAACATCAACCCTACTATTACTACTCTTACTATTACCCCCATTTTCCACCTCCATCAACAACTTCACCTCTCCCCCAAACAGGCCCTTATTCTCTCTCCTCACCATCTGCTGCATCAACTGCAGGTGCTGGCCGCAGCTCCTCACCACCACAACCACCACCATCTCCACCCTTCATTGATTTCCTTGGTGTTGGTACTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70808.p1 GENE.R_Transcript_70808~~R_Transcript_70808.p1 ORF type:5prime_partial len:306 (+),score=71.84,Myb_DNA-binding|PF00249.27|9.9e-16,Myb_DNA-binding|PF00249.27|1.5e-15,Myb_DNA-bind_6|PF13921.2|6.1e-14,Myb_DNA-bind_6|PF13921.2|1.5e-08 R_Transcript_70808:3-920(+)
HQNFSGENIITTTTTSSSKVVGCSKESNNRVCARGHWRPAEDSKLKELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRVYGNKWALIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRTSTLMPSHPHPFDLRRSSSSSSMEEDHSNSNQQCSSFYYGYPNPSSTGNGFCAQPTPLDSFSGPNSQNMVSMLSSSNCLDRPIPMPIQMQPQQHQPYYYYSYYYPHFPPPSTTSPLPQTGPYSLSSPSAASTAGAGRSSSPPQPPPSPPFIDFLGVGTS*

Click here to download the sequence:
Link to NCBI Protein BLAST