Transcript Information: R_Transcript_70811.p1


Annotated TAIR IDAT5G52500.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21301575-21302666 | Forward length=363
E-Value9E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2567612460626
Replicate 20.55072263387011
Replicate 31.1265608653846
Condition 2: 8 Hour
Replicate 11.7661935371783
Replicate 20.65982930023171
Replicate 31.7258908458729
Condition 3: 24 Hour
Replicate 12.0323304758951
Replicate 21.807808105785
Replicate 32.4399408503427


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70811.p1 GENE.R_Transcript_70811~~R_Transcript_70811.p1 ORF type:internal len:305 (+),score=20.50 R_Transcript_70811:2-913(+)
CAAAACTCACACCACCACCAACAAAAGGGTGTCTGTGTCTCACTAAAAACCAAACCAACTATAAAGAAAAAACAAAAGAGTGTGTTTAGTCTGAAAAACAGCATTATTCTGAAAGAGTGTGGGATGGTTTTAGGAGCGAAACTCTGCAGCAGCAGTAATGGCGGAAATACTACTAACACTAGTAGTAGTAATACTAGTAGTAAAGAAGGAAATTGGGGTATGGGATTTCTCTTGGTTTTCTTCCATCCTCATCCTGATGGTGATCCTCCAAATTACCAGAACAATCAAAGCCCAAACCCACTTAGAAAACGCAATTCATTTTCTCTATCCTCGTCTTTGAAATCCCCCACCACAAATGCCGCCTTGTTAGCCAAAACTCAATCAACTCTCTCCATTTGTGGCCTCTTAGTTTTCACCACTCTTCTTCTCTTCACTCTCTCCACTTTCGAACCCACCTCTATTACTACCACCACCACCACAAGCGCAGCTAATTACCGTTCTTCTTCTTCTTCGCCTCGCCGTATGCTGCACCAGATTTCCCGTTCGGGGATTTTTCGGAAGGGTGCCGACCAACGGGATGCCAATTCTACCCACATTGCCCCTGCTTTGCAGGGGATGGGGGTGTTGTACAGGAAGGGCAGTAAGGGGATGACGGATTTGGTCGTCGGACACGTGGCGGAAGGAGCGACGGAGAGGGAGGTCGCCACCTTCACGAGGCTGATTCATCACTCGGGCCTCCTCTCGCGGTCCGACTTGGTATTTATCTTTGATTCGCCGGGCTCGGCGGCCCGGCTCGGACAGGTGGTGAGGGCCGAGAGCGAGGATTTTGTACGGGTGGTGTGGCTGTGCAAGGAGGCGAACTCGAGCTGCACGGGCCTCGGGCCGGGTTTTGGGCTGGCCCGGTACATGAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70811.p1 GENE.R_Transcript_70811~~R_Transcript_70811.p1 ORF type:internal len:305 (+),score=20.50 R_Transcript_70811:2-913(+)
QNSHHHQQKGVCVSLKTKPTIKKKQKSVFSLKNSIILKECGMVLGAKLCSSSNGGNTTNTSSSNTSSKEGNWGMGFLLVFFHPHPDGDPPNYQNNQSPNPLRKRNSFSLSSSLKSPTTNAALLAKTQSTLSICGLLVFTTLLLFTLSTFEPTSITTTTTTSAANYRSSSSSPRRMLHQISRSGIFRKGADQRDANSTHIAPALQGMGVLYRKGSKGMTDLVVGHVAEGATEREVATFTRLIHHSGLLSRSDLVFIFDSPGSAARLGQVVRAESEDFVRVVWLCKEANSSCTGLGPGFGLARYMR

Click here to download the sequence:
Link to NCBI Protein BLAST