Transcript Information: R_Transcript_70841.p1


Annotated TAIR IDAT3G11945.2
Annotated Gene Namehomogentisate prenyltransferase
Annotated Gene Symbol(s)PDS2, ATHST, HST
Annotation TypeOrtholog
Chromosome Positionchr3:3780041-3782880 | Reverse length=393
E-Value1.7E-183
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.111376445249
Replicate 210.473448678248
Replicate 311.695910725565
Condition 2: 8 Hour
Replicate 19.0453665805118
Replicate 211.206747840406
Replicate 313.538966039206
Condition 3: 24 Hour
Replicate 111.992078128354
Replicate 29.8599980922581
Replicate 312.823619922441


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70841.p1 GENE.R_Transcript_70841~~R_Transcript_70841.p1 ORF type:5prime_partial len:425 (+),score=58.39,UbiA|PF01040.14|1.2e-36 R_Transcript_70841:2-1276(+)
CCATCAATCATATTCCTTGTTACTAGTAGTATATCCTCTACTCACATACTTACCTCACTAGCCAGCAAAACTCCTCTTTCCATCACCAACTTCTTCTTACTTCTAATGGAGGTCTTACACTGTTCATCCCCCTCCCTTCTTCGTCAACTTTCTTCAACTTCACCATCCCGAATTATTTCTCCCCAAATTTGTGCTTCCTCTCAATCATCCTGCAAATATAATTCCCCCCCATCTTCTAGAAACTTCCCTTCATTTCACCTGCTTCCTAACAGAATTTCCAGAAAACCCACTTCAAGTAAATTTTCCAGGCCTTTTCCCTTCCGGGCTTCTGCAGAAGTTGGAGCTGCTGGTTCTGACCCAGCTTTAAACAAAGTTTCCCTGTTCAGAGATGCAATTTGGAGATTCCTACGGCCACATACTATTCGTGGGACAGCTTTAGGTTCAGCTGCACTGGTGGCTAGAGCATTGATTGAGAATCCAAATTTGATAAGGTGGTCTTTGGTGGTGAAGGCTCTTTCTGGTCTTCTTGCTCTGATATGTGGGAATGGGTATATTGTGGGCATCAATCAGATCTACGATATTGGTATCGATAAGGTGAACAAACCGTACTTACCTATAGCGGCAGGTGATCTTTCAATTGGATCTGCATGGCTGCTAGTGTTGATTTTTGCTGTTGCTGGACTTACAATTGTTGCAACAAATTTTGGATCTTTTATCACGTCCTTGTATTGCCTGGGGCTGTTTCTTGGAACCATCTATTCAGTTCCTCCGTTTAGAATGAAGAGATTCCCTGTTGTAGCATTTCTCATCATTGCAACAGTCCGTGGATTTCTTTTAAACTTTGGTGTATACTATGCCACAAGAGCAGCTCTAGGCCTTCCGTTTGAGTGGAGTAATCCTGTGGCTTTTATAACGACATTTGTGACGTTGTTTGCATTGGTTATTGCCATAACAAAAGATCTCCCAGATGTGGAAGGTGATCGCAAGTTTCAGATATCGACCTTGGCAACAAAACTTGGTGTAAGAAACATTGCATTGCTTGGTTCTGGACTTTTGCTGGTAAACTATATCGGTTCTATAGTTGCAGCTCTTTATATGCCAGAGGCCTTTAGGCGGAGCTTGATGATACCTACACACACTATCCTGGCTGGGTGTCTGATTTTCCAGGCATGGTTGCTAGAACAAGCAAATTACTCCAAGGAAGCAATCATTAGCTTCTACAGATTTATTTGGAACTTATTTTACGCGGAGTATATCATATTTCCTTTTATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70841.p1 GENE.R_Transcript_70841~~R_Transcript_70841.p1 ORF type:5prime_partial len:425 (+),score=58.39,UbiA|PF01040.14|1.2e-36 R_Transcript_70841:2-1276(+)
PSIIFLVTSSISSTHILTSLASKTPLSITNFFLLLMEVLHCSSPSLLRQLSSTSPSRIISPQICASSQSSCKYNSPPSSRNFPSFHLLPNRISRKPTSSKFSRPFPFRASAEVGAAGSDPALNKVSLFRDAIWRFLRPHTIRGTALGSAALVARALIENPNLIRWSLVVKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSIGSAWLLVLIFAVAGLTIVATNFGSFITSLYCLGLFLGTIYSVPPFRMKRFPVVAFLIIATVRGFLLNFGVYYATRAALGLPFEWSNPVAFITTFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIALLGSGLLLVNYIGSIVAALYMPEAFRRSLMIPTHTILAGCLIFQAWLLEQANYSKEAIISFYRFIWNLFYAEYIIFPFI*

Click here to download the sequence:
Link to NCBI Protein BLAST