Transcript Information: R_Transcript_70872.p1


Annotated TAIR IDAT3G46440.1
Annotated Gene NameUDP-XYL synthase 5
Annotated Gene Symbol(s)UXS5
Annotation TypeOrtholog
Chromosome Positionchr3:17089268-17091611 | Reverse length=341
E-Value1.7E-240
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1139.10565578902
Replicate 2101.92081688961
Replicate 3122.61449045637
Condition 2: 8 Hour
Replicate 186.09315780285
Replicate 2102.61232658317
Replicate 3126.90251389997
Condition 3: 24 Hour
Replicate 1152.33810277042
Replicate 2139.40466843957
Replicate 3142.30198673989


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_70872.p1 GENE.R_Transcript_70872~~R_Transcript_70872.p1 ORF type:complete len:343 (+),score=83.69,GDP_Man_Dehyd|PF16363.1|5.3e-56,Epimerase|PF01370.17|4.5e-46,Polysacc_synt_2|PF02719.11|5.2e-08,Polysacc_synt_2|PF02719.11|0.011,3Beta_HSD|PF01073.15|4.5e-12,NAD_binding_4|PF07993.8|0.011,NAD_binding_4|PF07993.8|2.4e-06,RmlD_sub_bind|PF04321.13|1.8e-08 R_Transcript_70872:1056-2084(+)
ATGGCATCAAACGGGGATAAGCAATCAGGAACCAAGCCACCCCCACCTCCTTCTCCTTTGAGAAATTCTAAATTTTGTCAGTCAAACATGAGAATTTTGGTAACTGGAGGAGCTGGATTTATTGGCTCCCATCTTGTCGATAGGTTGATGGAAAATGAGAAGAATGAGGTGATTGTTGCTGATAATTACTTTACCGGCTCAAAGGACAACCTTAGGAAATGGATTGGCCATCCAAGATTTGAGCTTATCCGTCATGATGTCACAGAACCATTGTTGATTGAAGTTGATCAGATATATCACCTCGCATGTCCAGCATCTCCAATTTTTTACAAGCACAATCCTGTGAAGACTATCAAAACAAATGTCATGGGCACTTTGAACATGCTAGGACTTGCCAAACGTGTTGGAGCAAGGATTTTGCTTACTTCTACTTCAGAGGTGTATGGTGATCCTTTAATTCATCCTCAACCAGAAACCTACTGGGGAAATGTTAACCCTATTGGAGTTCGGAGCTGCTATGATGAAGGGAAGCGTGTTGCTGAAACTTTGATGTTTGATTATCACAGGCAGCACGGGATAGAAATTCGTGTGGCCCGTATCTTTAATACCTATGGGCCTCGCATGAATATTGATGATGGCCGGGTTGTGAGCAACTTCATTGCTCAAGCTCTTAGAGGTGAACCACTGACAGTTCAGGCTCCGGGAACACAAACTCGCAGTTTCTGTTATGTTGCTGACATGGTCGATGGTCTCATTAGACTCATGGAAGGAGAGAACACTGGACCAATCAACCTTGGAAACCCTGGTGAATTTACCATGCTTGAACTTGCTGAGACTGTGAAAGAGCTGATCAACCCAGATGTGAGGATTATATCAGTGGAGAACACACCTGATGACCCAAGACAAAGGAAGCCTGATATTACAAAGGCGAAGGAAGTTCTTGGATGGGAACCAAAGATCAAGTTGCGGGAAGGGCTCCCCCTCATGGAAGAGGATTTCCGCAAGAGGCTTGGAGTTCCAAAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_70872.p1 GENE.R_Transcript_70872~~R_Transcript_70872.p1 ORF type:complete len:343 (+),score=83.69,GDP_Man_Dehyd|PF16363.1|5.3e-56,Epimerase|PF01370.17|4.5e-46,Polysacc_synt_2|PF02719.11|5.2e-08,Polysacc_synt_2|PF02719.11|0.011,3Beta_HSD|PF01073.15|4.5e-12,NAD_binding_4|PF07993.8|0.011,NAD_binding_4|PF07993.8|2.4e-06,RmlD_sub_bind|PF04321.13|1.8e-08 R_Transcript_70872:1056-2084(+)
MASNGDKQSGTKPPPPPSPLRNSKFCQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKHNPVKTIKTNVMGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQAPGTQTRSFCYVADMVDGLIRLMEGENTGPINLGNPGEFTMLELAETVKELINPDVRIISVENTPDDPRQRKPDITKAKEVLGWEPKIKLREGLPLMEEDFRKRLGVPKN*

Click here to download the sequence:
Link to NCBI Protein BLAST