Transcript Information: R_Transcript_71081.p1


Annotated TAIR IDAT5G19350.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6518978-6521295 | Forward length=425
E-Value1.4E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.466604064949
Replicate 222.245508221387
Replicate 332.394425250394
Condition 2: 8 Hour
Replicate 129.640783883507
Replicate 235.613669934703
Replicate 344.818278854457
Condition 3: 24 Hour
Replicate 146.703639875123
Replicate 241.435623682297
Replicate 352.540508504703


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71081.p1 GENE.R_Transcript_71081~~R_Transcript_71081.p1 ORF type:complete len:437 (+),score=92.82,RRM_1|PF00076.18|2.3e-12,RRM_1|PF00076.18|5.6e-16,RRM_1|PF00076.18|1.6e-15,RRM_6|PF14259.2|3.2e-05,RRM_6|PF14259.2|2.1e-05,RRM_6|PF14259.2|1.5e-09,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|0.73,RRM_5|PF13893.2|6.4e-08,RRM_5|PF13893.2|9.4e+03 R_Transcript_71081:95-1405(+)
ATGTCAATGGCGGCACCGCTACCACAACCACAACCACAGCCACAGCCACAGCATCACCAACCACAAACGCTAGAAGAAGTAAGAACCCTTTGGATTGGCGACCTTCAAATTTGGGTCGATGAAAGTTATCTTCACTCCTGCTTTGCTCATACTGGCGAGGTTGTATCTGTAAAGGTAATACGTAATAAGATTACTGGGCATCCAGAGGGGTATGGGTTTGTTGAGTTTGTTTCGCATGCAGCTGCGGAACGTGTATTGCAAACATATAATGGAACTCCCATGCCAGGAACTGAGCAACCTTTTAGATTAAACTGGGCTTCTTTTGGGATTGGAGAAAGAAGACCTGATGCAGGCCCCGAGCATTCTATCTTTGTTGGGGATTTGGCACCTGATGTTTCAGATTATCTGTTGCAAGAGACCTTTCGAGCTCACTATCCCTCAGTGAGGGGGGCAAAAGTTGTCACTGATCCAAGCACGGGACGTTCAAAGGGGTATGGGTTTGTTAAATTTGCTGATGAGACAGAGAGAAATAGAGCCATGACTGAAATGAATGGTCAATATTGTTTATCGAGACCGATGCGTATTAGTGCTGCAACACCAAAAAAAGCACCTGGTGTTCAGCAGCAGTATGCTGCGGCTAAAGCTATATATCCTGCTCCAGCATACATAATGCCCACACTGCAAACAGTTCAACAACTAGCAATGGAGAATGATCCAAATAATACTACGATTTATATTGGTAATTTGGACCCAATTGTGACAGAAGAAGACCTGAGACAACATTGCTTGCTGTTTGGAGAGATTGGTTATGTTAAAATCCCCGCTAGTAAAGGGTGTGGTTTTGTGCAGTTTGCAGCTAGAGCATCTGCAGAGGAAGCTATACAGAAGCTGCAAGGAACGGTGATTGGTCAGCAAGTAGTTCGTGTTTCCTGGGGCAGGAGCCCAACTGCCAAACAGGATGCTGGTCCCTGGGGTCAGCAAGTCGATCCAAGTCAATGGAGTGCATATTATGGATATGGGCAAGGATATGATGCTTATTCATATGGTGCTGTTCAGGATCCATCATTATATGCCTATGGTGCATATGCTGGTTATGCTCAATATTCACAACAGCCTGAAGGTGCACAAGATATGGCGGCTTCAGGAATGGAGCAAAAGGAGGAGCTTTTTGATCCCTTGGCTACTCCTGATGTGGATCAGCTGAATGCCGCTTATCTTGCCATCCATGGAAGAGCAATTCTGGGCCGCCCAATGTGGTTGACAACCTCTTCAGTTGGAAGACAACCTTCATCCATTAATAGCTCCCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71081.p1 GENE.R_Transcript_71081~~R_Transcript_71081.p1 ORF type:complete len:437 (+),score=92.82,RRM_1|PF00076.18|2.3e-12,RRM_1|PF00076.18|5.6e-16,RRM_1|PF00076.18|1.6e-15,RRM_6|PF14259.2|3.2e-05,RRM_6|PF14259.2|2.1e-05,RRM_6|PF14259.2|1.5e-09,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|0.73,RRM_5|PF13893.2|6.4e-08,RRM_5|PF13893.2|9.4e+03 R_Transcript_71081:95-1405(+)
MSMAAPLPQPQPQPQPQHHQPQTLEEVRTLWIGDLQIWVDESYLHSCFAHTGEVVSVKVIRNKITGHPEGYGFVEFVSHAAAERVLQTYNGTPMPGTEQPFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVSDYLLQETFRAHYPSVRGAKVVTDPSTGRSKGYGFVKFADETERNRAMTEMNGQYCLSRPMRISAATPKKAPGVQQQYAAAKAIYPAPAYIMPTLQTVQQLAMENDPNNTTIYIGNLDPIVTEEDLRQHCLLFGEIGYVKIPASKGCGFVQFAARASAEEAIQKLQGTVIGQQVVRVSWGRSPTAKQDAGPWGQQVDPSQWSAYYGYGQGYDAYSYGAVQDPSLYAYGAYAGYAQYSQQPEGAQDMAASGMEQKEELFDPLATPDVDQLNAAYLAIHGRAILGRPMWLTTSSVGRQPSSINSSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST