Transcript Information: R_Transcript_7116.p1


Annotated TAIR IDAT1G27650.1
Annotated Gene NameU2 snRNP auxiliary factor small subunit, putative
Annotated Gene Symbol(s)ATU2AF35A
Annotation TypeOrtholog
Chromosome Positionchr1:9615152-9616042 | Forward length=296
E-Value8.8E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.444813115531
Replicate 26.8064929920966
Replicate 313.089564340658
Condition 2: 8 Hour
Replicate 114.193729406233
Replicate 218.675022197034
Replicate 321.043900224734
Condition 3: 24 Hour
Replicate 121.633318349183
Replicate 211.815317262809
Replicate 316.175254287844


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7116.p1 GENE.R_Transcript_7116~~R_Transcript_7116.p1 ORF type:complete len:364 (+),score=49.26,zf-CCCH|PF00642.20|5.5e-07,zf-CCCH|PF00642.20|9.4e-05,RRM_5|PF13893.2|1.7e-07,RRM_5|PF13893.2|9.8e+03,RRM_1|PF00076.18|3.9e-06 R_Transcript_7116:115-1092(+)
ATGGCGGAGCATTTGGCGTCGATATTCGGGACAGAGAAGGACAGAGTGAATTGCCCATTCTACTTCAAGATCGGAGCTTGTAGGCATGGCGATCGTTGCTCTAGGCTTCATACCAAACCTAGCATTAGCCCTACCCTTTTGCTCTCGAACATGTATCAACGTCCTGATATGATCACTCCTGGTGTTGATGCTCAGGGTAATCCCATCGATCCTCGTAAGATTCAAGAACATTTCGAGGACTTCTATGAAGATCTTTTTGAGGAACTCAACAAATATGGAGAAATTGAGTCACTGAATGTCTGTGACAACCTGGCTGATCACATGGTGGGCAATGTTTATGTTCAATATAGGGAAGAAGAGCAGGCTGGTAATGCACTGCGCAATTTAAGTGGGAGATACTATGCTGGACGTCCCATCATTGTGGATTTCTCTCCAGTCACAGATTTTCGTGAAGCCACTTGCAGACAATACGAAGAGAACACTTGTAATCGTGGTGGATACTGTAACTTCATGCACCTGAAACGAATTAGCAGGGAGTTGAGGCGCCATTTGTTCGGGAGGTACAGAAGAAGACACAGCAGAAGCCGAAGCCGAAGTCCATACAGACACAGGAGCTATGACTATGACGACCGCCATCATGGGCGTAGTCATAGCAGGAGAAGTTACGATGACAGGGATGCATATTATGAAAGTCGCAGCAGGGGATACAGGAGCACAAGTCCTGACCATAGGCGAGGGAGAAGCAGAAGTCCTAGTAGTAAGAGAGACAGGAGCCCTGTCAGGGAAGGAAGTGAAGAGAGGCGTGCAAAGATTGAGCAATGGAACAGGGAGAAAGAAGAAGCTGAACGGGCCAGGGCCCAGACTGATGCTGGCAACAACAAAAACAATGATGGGTATTATGATGGACCTAAACAGAATGGGGAACAAAACTATTCATACCAGCAGCCACATCCACGGCAGGAAGGATATGGATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7116.p1 GENE.R_Transcript_7116~~R_Transcript_7116.p1 ORF type:complete len:364 (+),score=49.26,zf-CCCH|PF00642.20|5.5e-07,zf-CCCH|PF00642.20|9.4e-05,RRM_5|PF13893.2|1.7e-07,RRM_5|PF13893.2|9.8e+03,RRM_1|PF00076.18|3.9e-06 R_Transcript_7116:115-1092(+)
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPRKIQEHFEDFYEDLFEELNKYGEIESLNVCDNLADHMVGNVYVQYREEEQAGNALRNLSGRYYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRELRRHLFGRYRRRHSRSRSRSPYRHRSYDYDDRHHGRSHSRRSYDDRDAYYESRSRGYRSTSPDHRRGRSRSPSSKRDRSPVREGSEERRAKIEQWNREKEEAERARAQTDAGNNKNNDGYYDGPKQNGEQNYSYQQPHPRQEGYGY*

Click here to download the sequence:
Link to NCBI Protein BLAST