Transcript Information: R_Transcript_71170.p1


Annotated TAIR IDAT1G50440.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18686099-18687646 | Forward length=250
E-Value6.6E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3256668397904
Replicate 21.297068751586
Replicate 31.5035310391297
Condition 2: 8 Hour
Replicate 11.41810028652
Replicate 21.5540381202368
Replicate 32.4529203541063
Condition 3: 24 Hour
Replicate 10.35456072938539
Replicate 20.76639895758763
Replicate 30.50705107382774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71170.p1 GENE.R_Transcript_71170~~R_Transcript_71170.p1 ORF type:complete len:259 (+),score=39.34,RINGv|PF12906.3|8.4e-10 R_Transcript_71170:247-1023(+)
ATGCAATTAGCATCAAATGGCAGTCATAGAGAAGACAGTTCGGAAACAGAGCCCATATTGTCTGAATCCCGAATTGTGGAAGAGTATCTGGAATCTACTCCTCTCTGTGAAATCAGAACTGTTGATGAGGGTGCTTCAGCTTCATACGGCCCAACAAATTCCGATGAGAACTGCAGTCTAGTAAATTCAGAACCACCACAATGCCGGATATGCCTTGACAATGGAGGTACAGATTTAATTTCTCCATGCCATTGCAAAGGAACCCAAAAGTATGTGCATAGGTCATGTCTTGACAATTGGAGGTCTACAAAGTCATTCTGCCAGGAAGGCTTTGCTTTTGCTCATTGTACAGAATGCAGGGCAAGATTCTTATTGCGAGCAAATGTCCCGTCTGATCGCTGGTGGTTGAGATTGAAGTTTCAGTTCCTTGTTGCTAGGGATCACGCATTGATTTTCATTGTTGTCCAGCTGATTGTAGCCTTGTTAGGCTTGCTGGTATACAAATTTTATGGTGAAGAACTCCGTGAAATGTTTGGTTATGAGGAACACCCTTATGGGTTTTATACAATGGCTGTTTTAGCCATTCTATTGGTGGGCTTGCTCTATGGTTTTTTCATAGCCATAATATGTGGACAAAGGATAAATGAACGCCACTATCATGTTCTTGCGAAGCAAGAATTGACCAAGGAATATATAGTGGAAGACCGAGAAAGTAAAGATGTCCCTGAACTTGATCCTAGCCACATATCAGAGCTGAGGATGTTGGGCCTGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71170.p1 GENE.R_Transcript_71170~~R_Transcript_71170.p1 ORF type:complete len:259 (+),score=39.34,RINGv|PF12906.3|8.4e-10 R_Transcript_71170:247-1023(+)
MQLASNGSHREDSSETEPILSESRIVEEYLESTPLCEIRTVDEGASASYGPTNSDENCSLVNSEPPQCRICLDNGGTDLISPCHCKGTQKYVHRSCLDNWRSTKSFCQEGFAFAHCTECRARFLLRANVPSDRWWLRLKFQFLVARDHALIFIVVQLIVALLGLLVYKFYGEELREMFGYEEHPYGFYTMAVLAILLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRESKDVPELDPSHISELRMLGLY*

Click here to download the sequence:
Link to NCBI Protein BLAST