Transcript Information: R_Transcript_71182.p1


Annotated TAIR IDAT3G52270.1
Annotated Gene NameTranscription initiation factor IIF, beta subunit
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19387180-19388902 | Reverse length=269
E-Value4E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8941751934142
Replicate 22.3769396697696
Replicate 31.2966077884615
Condition 2: 8 Hour
Replicate 14.0424777035546
Replicate 25.0628411715892
Replicate 34.4522818502836
Condition 3: 24 Hour
Replicate 14.0067871104955
Replicate 22.0806848009979
Replicate 32.2713655807158


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71182.p1 GENE.R_Transcript_71182~~R_Transcript_71182.p1 ORF type:5prime_partial len:212 (+),score=39.47,TFIIF_beta|PF02270.11|0.67,TFIIF_beta|PF02270.11|6.5e-25 R_Transcript_71182:2-637(+)
AATGATCTTCCACCTGTTGCTAAAGTCATCGTTTCCATTGACCCACTTGGCCCTTCCAATGACAACGGCTCCACTCAGTTCACCATGGAATTGACTGGCACTCAATTGGAAAATATACCCAAGGTTTACTCAATGGATATGTCCACTGATTTTGTTCCGATGTCTGTCTTTTCTGAATCTCAAGGGAAGATATCTGTAGAAGGGAAAATTTTAAATAAATTTGACATGAGGCCTCACAAAGAAGCCATTGAGAGTTATGGGCAACTTTGCCGTGAGCGAACCAAAAAATACATGACGAAGAGTAGACAGATTCAGGTAATTGGCAGTGACAGGCCCATAATACCCATGCCAGGAATCATTCATGTGCAGGAAAGGAGAAAGCCAGTTGTGAAAGCATCAGAGACTAAAAGAACAAGAAGGGATCGTGGAGAGATGGAAGAGATTATGTTAAAACTTTTTGAACAGCAATCTAACTGGACACTGAAAGAGCTGATCCACAAGACAGATCAACCTGAGCAATTTATGAAAGATATACTGAAAGACCTTTGTGTCTACAACAACAAGGGAGCTAATCAAGGTTCCTATGAACTGAAGCCCGAATACAAGAGAACTGTTGAAGACCCAAGCGGTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71182.p1 GENE.R_Transcript_71182~~R_Transcript_71182.p1 ORF type:5prime_partial len:212 (+),score=39.47,TFIIF_beta|PF02270.11|0.67,TFIIF_beta|PF02270.11|6.5e-25 R_Transcript_71182:2-637(+)
NDLPPVAKVIVSIDPLGPSNDNGSTQFTMELTGTQLENIPKVYSMDMSTDFVPMSVFSESQGKISVEGKILNKFDMRPHKEAIESYGQLCRERTKKYMTKSRQIQVIGSDRPIIPMPGIIHVQERRKPVVKASETKRTRRDRGEMEEIMLKLFEQQSNWTLKELIHKTDQPEQFMKDILKDLCVYNNKGANQGSYELKPEYKRTVEDPSGS*

Click here to download the sequence:
Link to NCBI Protein BLAST