Transcript Information: R_Transcript_71253.p3


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value2.4E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.513225514788
Replicate 222.059404234845
Replicate 323.48665500365
Condition 2: 8 Hour
Replicate 114.412566076543
Replicate 214.43550599874
Replicate 316.198589224523
Condition 3: 24 Hour
Replicate 134.291408264166
Replicate 220.380175936863
Replicate 336.571860995828


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71253.p3 GENE.R_Transcript_71253~~R_Transcript_71253.p3 ORF type:3prime_partial len:158 (+),score=18.55,Glyco_hydro_28|PF00295.13|9.2e-23 R_Transcript_71253:716-1186(+)
ATGCACTCTGGCTTAATGACAGCATCAAATTTCAGTGATATAGTTATACAGGGGATTACAATCATCTCTCCAGTAAAGTCTCCTAATACAGATGGTATCAACCCAGATTCCTGCAGCAACGTCAGAATTGAGGATTGCTACATTGTCTCTGGGGATGATTGTGTGGCAGTGAAGAGTGGTTGGGATGAGTATGGAATTGCATTTGGCATGCCAACCCAGCACCTGACCATCCGCCGCCTGACTTGTATCTCACCCTACAGCGCGACCATCGCCTTGGGGAGTGAGATGTCTGGTGGGATCAGCGATGTCCGGGCTGAGGACATCACGGCCATCAACACAGAATCCGGGGTCAGGATCAAGACAGGTGCAGGGAGGGGAGGCTATGTAAGGGACATCTATGTAAGGAGAATGACCTTGCAAACGATGAAGTGGGCATTCTGGATGACTGGGAATTATGGATCACACCCTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71253.p3 GENE.R_Transcript_71253~~R_Transcript_71253.p3 ORF type:3prime_partial len:158 (+),score=18.55,Glyco_hydro_28|PF00295.13|9.2e-23 R_Transcript_71253:716-1186(+)
MHSGLMTASNFSDIVIQGITIISPVKSPNTDGINPDSCSNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQHLTIRRLTCISPYSATIALGSEMSGGISDVRAEDITAINTESGVRIKTGAGRGGYVRDIYVRRMTLQTMKWAFWMTGNYGSHPD

Click here to download the sequence:
Link to NCBI Protein BLAST