Transcript Information: R_Transcript_71254.p1


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value2.4E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1514.34236404547
Replicate 2366.51875210831
Replicate 3374.96147850845
Condition 2: 8 Hour
Replicate 1216.291807034
Replicate 2218.99466819066
Replicate 3189.87160950532
Condition 3: 24 Hour
Replicate 1407.59218070138
Replicate 2299.23384978922
Replicate 3448.2636662265


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71254.p1 GENE.R_Transcript_71254~~R_Transcript_71254.p1 ORF type:5prime_partial len:252 (+),score=30.56,Glyco_hydro_28|PF00295.13|5.9e-18 R_Transcript_71254:1-756(+)
TGGTGTATGATGAATAGAGCAATAACTATGCCAGTATTTTGTATGAACTCAGATTCCTGCAGCAACGTCAGAATTGAGGATTGCTACATTGTCTCTGGGGATGATTGTGTGGCAGTGAAGAGTGGTTGGGATGAGTATGGAATTGCATTTGGCATGCCAACCCAGCACCTGACCATCCGCCGCCTGACTTGTATCTCACCCTACAGCGCGACCATCGCCTTGGGGAGTGAGATGTCTGGTGGGATCAGCGATGTCCGGGCTGAGGACATCACGGCCATCAACACAGAATCCGGGGTCAGGATCAAGACAGGTGCAGGGAGGGGAGGCTATGTAAGGGACATCTATGTAAGGAGAATGACCTTGCAAACGATGAAGTGGGCATTCTGGATGACTGGGAATTATGGATCACACCCTGATAACAACTATGACCCAAACGCCCTGCCTGACATCCATGGGATTAATTACCGAGACGTTGTTGCAGATGAGGTGAAGCAGGCCGGAAGGTTGGAGGGGATCTCAGGTGATCCTTTTACTGGGATTTGTATGTCGAATGTGACGATTTCACTTGGTGTAAACGGGAGGAAGAAGATGCCTTGGAGATGCTCGGATGTGGAGGGAATTACCAGTGGGGTGACACCTCCACTATGTGATGGATTTCGTGATCTAGGACAGGGAGATGCGATAAAAGAGTGTGATTTTCCGGAAGACAGACTTCCAATTGACAATATCAAGCTCAAACAATGTTCTTACAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71254.p1 GENE.R_Transcript_71254~~R_Transcript_71254.p1 ORF type:5prime_partial len:252 (+),score=30.56,Glyco_hydro_28|PF00295.13|5.9e-18 R_Transcript_71254:1-756(+)
WCMMNRAITMPVFCMNSDSCSNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQHLTIRRLTCISPYSATIALGSEMSGGISDVRAEDITAINTESGVRIKTGAGRGGYVRDIYVRRMTLQTMKWAFWMTGNYGSHPDNNYDPNALPDIHGINYRDVVADEVKQAGRLEGISGDPFTGICMSNVTISLGVNGRKKMPWRCSDVEGITSGVTPPLCDGFRDLGQGDAIKECDFPEDRLPIDNIKLKQCSYR*

Click here to download the sequence:
Link to NCBI Protein BLAST