Transcript Information: R_Transcript_71258.p3


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value1.4E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6593600867926
Replicate 21.6542539721932
Replicate 30.83297227622373
Condition 2: 8 Hour
Replicate 10.44519754449537
Replicate 20.27104099201437
Replicate 30.99008785202111
Condition 3: 24 Hour
Replicate 11.5305204818469
Replicate 20.80200941420281
Replicate 31.7244858238162


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71258.p3 GENE.R_Transcript_71258~~R_Transcript_71258.p3 ORF type:3prime_partial len:165 (+),score=10.32,Glyco_hydro_28|PF00295.13|1.6e-13 R_Transcript_71258:807-1298(+)
ATGGTATCAACCCAGGTACTATTGGCTCCATGTTTATATCTGTGTGTTCAATATAATCATGATTATTCATTGCACTGGTGTATGATGAATAGAGCAATAACTATGCCAGTATTTTGTATGAACTCAGATTCCTGCAGCAACGTCAGAATTGAGGATTGCTACATTGTCTCTGGGGATGATTGTGTGGCAGTGAAGAGTGGTTGGGATGAGTATGGAATTGCATTTGGCATGCCAACCCAGCACCTGACCATCCGCCGCCTGACTTGTATCTCACCCTACAGCGCGACCATCGCCTTGGGGAGTGAGATGTCTGGTGGGATCAGCGATGTCCGGGCTGAGGACATCACGGCCATCAACACAGAATCCGGGGTCAGGATCAAGACAGGTGCAGGGAGGGGAGGCTATGTAAGGGACATCTATGTAAGGAGAATGACCTTGCAAACGATGAAGTGGGCATTCTGGATGACTGGGAATTATGGATCACACCCTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71258.p3 GENE.R_Transcript_71258~~R_Transcript_71258.p3 ORF type:3prime_partial len:165 (+),score=10.32,Glyco_hydro_28|PF00295.13|1.6e-13 R_Transcript_71258:807-1298(+)
MVSTQVLLAPCLYLCVQYNHDYSLHWCMMNRAITMPVFCMNSDSCSNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQHLTIRRLTCISPYSATIALGSEMSGGISDVRAEDITAINTESGVRIKTGAGRGGYVRDIYVRRMTLQTMKWAFWMTGNYGSHPD

Click here to download the sequence:
Link to NCBI Protein BLAST