Transcript Information: R_Transcript_71263.p1


Annotated TAIR IDAT3G61490.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22758439-22760137 | Forward length=476
E-Value7.4E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1244.48344262894
Replicate 289.428686958307
Replicate 3139.50081996387
Condition 2: 8 Hour
Replicate 179.805782050281
Replicate 269.862966810688
Replicate 3105.26013354468
Condition 3: 24 Hour
Replicate 1156.33173493151
Replicate 2104.20818089569
Replicate 3209.61240996447


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71263.p1 GENE.R_Transcript_71263~~R_Transcript_71263.p1 ORF type:3prime_partial len:378 (+),score=57.99,Glyco_hydro_28|PF00295.13|4.3e-36,Pectate_lyase_3|PF12708.3|2e-14 R_Transcript_71263:513-1643(+)
ATGCAGCTACTTCACAGAAATTTCATTAAAAAAAAATTGGAGGAAGAATTTGTGACAAAGGTGACATTGATATTATTATTGATCAGTACAATTAGCATAGGAGGGGGAGAATGTAGGAAAACAAGGGTGTTAGAAGAGTATACTTCTACATCATTTGAGTACCCTGCCTTAAACTGCAGGGCTCACAGTGCATCTTTGGCTGAGTTTGGAGGAGTTGGTGATGGGAAAACTCTGAACACCAAGGCATTTCAGGATGCAATTAATCACTTAAGCCAATATGAAAATGATGGAGGTGGTCAGCTCTTTGTTCCTCCAGGAAAATGGTTAACTGGAAGCTTCAATCTCACCAGCCACTTCACTCTTTACCTTCATAGGGATGCTGTTCTCCTTGCTTCTCAGGATATTAGCAGCTGGCCAGTGATCGACCCTCTGCCCTCGTATGGTAGAGGAAGGGATGCAAAGGGAGGAAGATATATTAGTCTCATCTTTGGTACAAATCTTACTGATGTCATTATAACAGGTGAAAATGGCACAATTGATGGTCAAGGGGAACTCTGGTGGCAGCAATTTCACAGGAGCAAGCTGAAGTACACACGGCCATACTTGATTGAGTTGATGTTCTCCAATACCATACAAATTTCTAACATAACACTCGTTAATTCCCCAACATGGAATGTTCATCCAGTTTATAGCAGTGATATAGTTATACAAGGGATTACAATCATCGCTCCAGTAAAGTCCCCTAATACAGATGGTATCAACCCAGATTCCTGCAGCAACGTCAGAATTGAGGATTGCTACATTGTCTCTGGGGATGATTGTGTGGCAGTGAAGAGTGGTTGGGATGAGTATGGAATTGCATTTGGCATGCCAACCCAGCACCTGACCATCCGCCGCCTGACTTGTATCTCACCCTACAGCGCGACCATCGCCTTGGGGAGTGAGATGTCTGGTGGGATCAGCGATGTCCGGGCTGAGGACATCACGGCCATCAACACAGAATCCGGGGTCAGGATCAAGACAGGTGCAGGGAGGGGAGGCTATGTAAGGGACATCTATGTAAGGAGAATGACCTTGCAAACGATGAAGTGGGCATTCTGGATGACTGGGAATTATGGATCACACCCTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71263.p1 GENE.R_Transcript_71263~~R_Transcript_71263.p1 ORF type:3prime_partial len:378 (+),score=57.99,Glyco_hydro_28|PF00295.13|4.3e-36,Pectate_lyase_3|PF12708.3|2e-14 R_Transcript_71263:513-1643(+)
MQLLHRNFIKKKLEEEFVTKVTLILLLISTISIGGGECRKTRVLEEYTSTSFEYPALNCRAHSASLAEFGGVGDGKTLNTKAFQDAINHLSQYENDGGGQLFVPPGKWLTGSFNLTSHFTLYLHRDAVLLASQDISSWPVIDPLPSYGRGRDAKGGRYISLIFGTNLTDVIITGENGTIDGQGELWWQQFHRSKLKYTRPYLIELMFSNTIQISNITLVNSPTWNVHPVYSSDIVIQGITIIAPVKSPNTDGINPDSCSNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQHLTIRRLTCISPYSATIALGSEMSGGISDVRAEDITAINTESGVRIKTGAGRGGYVRDIYVRRMTLQTMKWAFWMTGNYGSHPD

Click here to download the sequence:
Link to NCBI Protein BLAST