Transcript Information: R_Transcript_715.p1


Annotated TAIR IDAT5G60040.2
Annotated Gene Namenuclear RNA polymerase C1
Annotated Gene Symbol(s)NRPC1
Annotation TypeHomolog
Chromosome Positionchr5:24173590-24183269 | Forward length=1391
E-Value2E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2915175492116
Replicate 21.2907561731331
Replicate 31.7837213701922
Condition 2: 8 Hour
Replicate 11.5052785828224
Replicate 23.1616820636103
Replicate 34.389118961487
Condition 3: 24 Hour
Replicate 13.8106196423034
Replicate 22.2597601322313
Replicate 33.8124075786604


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_715.p1 GENE.R_Transcript_715~~R_Transcript_715.p1 ORF type:3prime_partial len:488 (+),score=86.40,RNA_pol_Rpb1_1|PF04997.8|6.3e-74,RNA_pol_Rpb1_2|PF00623.16|1.1e-61 R_Transcript_715:118-1578(+)
ATGATGAAACCTCGTGAACAAATACAGTTCACCAAAAGGCCTTATATCGAGGACGATGAACCTCGACGAATTAAAGGCATCCAGTTTTCGAGGTTTTCAGAGTCGGACATTAGTAAAATTGCTGAAGTTGAAGTGTTTAGAGCTTCTTACTATGACACTCAGAAAAAACCTATTGCCAATGGTTTATTGGACCCCAAAATGGGACCCCCAAACAAAAGCAGTGGTTGTTGTGCAACATGTAATGCAAGTTTTCACGACTGTCCTGGTCATTATGGCTATGTGACTCTTGCACTGCCTGTTTTCAATATCGGCTATGCTAATTCCATTCTAGATGTTCTGAAGTGTATTTGCAAGTCTTGCTCTCATGTTTTGCTGCCGGAAAAAGAATGTAAGGATTATTTGAAGAAGATGAGAAGCAAGGGCGATGCTCTGTTCAAAACTGAACTGAAGAAAAGGATTGTTAAGAGGTGTACCTCCAGAGCAGAAGTGAAGTGCTTCAGATGTGGATATGTAAATGGAAAAGTGAAGAAGGGTAAAACTGTTTTGTCAGTAGTTCACAATTGTCCAAACCAGGACAAAGATGATGAAGAAAGAAGAACACCAACACTCTCTTCTATAAGTCCACTGGATGCACTCTTTTTATTTAAACAAATGCAAGATCAGGATTGTGAGGTACTCTATTTGAATGATAGACCTGAGAAGCTTATAATGAACAACTTACCAGTTCCTCCAATGGCCATTCGCCCATCTGTTTTTGTGGATGGAGGAATGCAGAGCAATGAGAATGACATTACAGAAAGGTTAAAGAGAGTTCTTCAAGCAAACGCTTGTGTTCGGCAGGGCTTGCAAGAACCGAGTAACTCATCGAAGATTTCGGATGATTGGGATTATCTTCAAGTTGAAGTTGCTCAACTTATAAACAGTGATGCACGTGTTGCTTTAGTAGGCCAGCAGCCTACGAAGCCATTGAGTGGGTTTGTTCAACGTCTAAAAGGAAAGCAGGGTCGATTCCGTGGGAACCTGTCTGGAAAGCGTGTTGAGTTCACTGGAAGGACTGTTATATCGCCTGATCCTAATCTGAAAATCACAGAGGTTGCAGTTCCACAGTTGATGGCGTCAATCTTAACTTATCCTGAACGTGTCAACCATCACAACATCGAAAAGCTGAGGCAATGTGTGCGTAATGGGCCAAAGAAGTATCCCGGTGCAAAGCTGGTAGTGAAACCCAATGGTGATCAAATAGATTTAACATTTGCAGGTAGAAAACGGACTGCTGATGAACTAAAGTTTGACTGCATAGTTTATCGTCATCTTGAGGATGGTGATGTTATTCTTTTCAACAGGCAACCGAGCTTGCATCGGATGTCTATCATGTGCCATAGGGCTAGAATAATGCCATGGAGAACTTTGAGATTCAATGAGTCTGTTTGCAACCCTTACAATGCTGATTTTGATGGTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_715.p1 GENE.R_Transcript_715~~R_Transcript_715.p1 ORF type:3prime_partial len:488 (+),score=86.40,RNA_pol_Rpb1_1|PF04997.8|6.3e-74,RNA_pol_Rpb1_2|PF00623.16|1.1e-61 R_Transcript_715:118-1578(+)
MMKPREQIQFTKRPYIEDDEPRRIKGIQFSRFSESDISKIAEVEVFRASYYDTQKKPIANGLLDPKMGPPNKSSGCCATCNASFHDCPGHYGYVTLALPVFNIGYANSILDVLKCICKSCSHVLLPEKECKDYLKKMRSKGDALFKTELKKRIVKRCTSRAEVKCFRCGYVNGKVKKGKTVLSVVHNCPNQDKDDEERRTPTLSSISPLDALFLFKQMQDQDCEVLYLNDRPEKLIMNNLPVPPMAIRPSVFVDGGMQSNENDITERLKRVLQANACVRQGLQEPSNSSKISDDWDYLQVEVAQLINSDARVALVGQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPQLMASILTYPERVNHHNIEKLRQCVRNGPKKYPGAKLVVKPNGDQIDLTFAGRKRTADELKFDCIVYRHLEDGDVILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGD

Click here to download the sequence:
Link to NCBI Protein BLAST