Transcript Information: R_Transcript_71576.p1


Annotated TAIR IDAT5G47400.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19229162-19232586 | Forward length=862
E-Value1.2E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.268383592516
Replicate 27.0164181719029
Replicate 39.0702592751474
Condition 2: 8 Hour
Replicate 110.158700589715
Replicate 211.194539837264
Replicate 312.864067047487
Condition 3: 24 Hour
Replicate 113.433067532982
Replicate 210.151537824793
Replicate 313.165744181148


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71576.p1 GENE.R_Transcript_71576~~R_Transcript_71576.p1 ORF type:complete len:793 (+),score=109.56,mit_SMPDase|PF14724.2|0.00011,mit_SMPDase|PF14724.2|3.3e-05,mit_SMPDase|PF14724.2|0.48 R_Transcript_71576:267-2645(+)
ATGACTCCACCGCCACAGCCGTCGTATGCTCTCGACTCCCACTCAAAACCCTCAGACCTAGCCACTAAAATCCTCAACGCCAACACGCCTTCCCAAATCACCGCCGTCATCTCCGCCATCGAATCTCACCTCTCCTCCCATTCTCCCGACCAAAACCGCCATTTCTTCTCCCTCGCTTTCCCAACCCTAATATGCAAGTTCTTCGGCTTCGACGATTCTCTCTCTCCTCAACAACAACAACAACAACAACAACCTCCTTCTACCGGATGGATCGATACAGTTTCGTCTTCAAACGATTCCGAACTCTCCGGTAAGGTCTTCAAACTTCTTTCCCCAAACGGAACCCTAATGAACTCAATTCTCTCCGTAGATCGTTTATCTCTCGTTAAATACGTCTTTCCTGTTGAACGCTTGCCTGTTTGGGTTAGGTTTATGCTCTCTAGTGAAAAGGAGTCGCGAATTTTGTCCGATTTGCGTGTCTTGTTTAAGGGGCGCATCAAAGAAGATGAAATTAAAGGCACTTTTCAAGTTCAGTTGAATGTTTTCGAGTATTTCATGTTCTGGTTTGCTTATTATCCTGTTTGTAGAGGTAATAGTGATAAGCATAGAGGTGCGGTTTTAGTTTCCAGTAGTCGGAAATTTAGGTTAGAGAATTGGACTTCTTCGATTTCGGTTTTAGCTAGTGGTGGTAGTAAACGTGGTACTGAACAGAAGATTGAGTGTAATTTGTACTTGAAGCTTTTGTATGCTTATCTTCGGAGTTTTGTCCCTATGAATGATTTGAATGCTCATCACCAGCCTTATCGTAGCTCATTGTTGCATTATTCTACGAGCTATGATGATTCGGTGCTGCTTAGGGCCGAGTCCTTGGTTGATACCTTGGTGCATTATTGGTTGGTTGATAATGACTTCTCGCCATTGGCTGTGAATATGTGCAAGTCGTTTGGTATATCATTTCCTTTTCGGACTGTTTTGGGGGAGACGCCGCCAGCTTCTGGTTTGGGTGAGGTGGTCAGGTTGTTTGTCAAGTACTTGAATTTGAGTGCGGTTGTGGCAGCTGAGGGGTCGAGTCAGGTTGAGTTTAGTGGGAATCTAAAGACAAGGGAGGTTGGATCTGTGCTTCCTAGCTTGCCATTGGGTGGGTCTTGGAACTTGTATATTCAGAGGCCACTGTATAGGTTCATATTGAGGACGTTCTTGTTCTGCCCGGTGGAGTCTTCTATGAAGAATGTATCGGAAGTGTTTTCAGTTTGGGTTAGTTATATTGAGCCGTGGAGGCTGAGCAAGGAAGAGTTTGCTGAACTTGATGGAAAGGTGGATGGGTCAAATAAAAGCCTAGATGGTGGTCAGGGAAACCAACTTCAATATTCGGCCATTTGGCAAGGCTATGTGTTGTCCAATTACTTATTCTACAGTTCGTTGGTTATGCATTTTATAGGGTTTGCTCATAAGTTCCTTCACAGTGATGCTGAAATGATCGTCCAGATGGTGTCAAAGATTATAGATATACTAACCTCTTCAACTGAGCTACTGGAGCTTGTAAAGAATGTTGATACTGTGTTCCACACCAAAAATCCTGGATCAGGCAAGTCGATGCTGAATAGCTTGTCTAAATTTGTCCCACAGATTCGAGAGCAGCTTCAGGATTGGGAAGATGGCTTAAGTGAGAGTGATGCTGACGGATCCCTCTTACATGAGAACTGGAACAGAGACCTGAGACTCTTTGGTGATGGTGAGGATGGTGGCCAGCAGCTACTTCAGCTTCTCATCTTGCGGGCTGAAACTGAGCTATCAGCCATCGCTGGTGATAATCTTGCAAACAACCTTCAGTGTCTAGCCTCTTTGAAGTCACGGCTACGCTATTTGTTTGGTGATCATGTCGTGAAGCAGTCTCCTGTATCTCCACGAATGGGACAGCAGCAGCGGTATCGTGATGAGCTGTTCAATCCCAGGAGGCTTGGAAATGGCTCAATCAGCAACGTGAAGTACAAGGGGGATTGGATGAGGCGGCCCATATCAGATGACGAGGTTGCTTGGCTGGCTAAGCTTCTCATCCAATTATCCAGTTGGCTGAATGAAAGTCTAGGTCTGTATCAAGGGGAAGGAGCCCACACAAACGCAAACGGTACTTTCTCCTATGTCGAGGTACCTGTTGACGTGGTGAATGAATACGGTATGTCAGATTCTATAAGAGTCATGCTATATTCAATATCATCTTGGTTCTGCAGTTTGCGCTTGGCAATAGCTAGGGTGATGATCAGGCATGGACTTAAAGTGAACCTGAGATTTTTTGCGCGTAAATGGTTTGTAATGATGGTGCTTGTCTTTGCCTTGTTCAACATGCTGAGGAGAGCCTTTAGTAGGACACCAATTACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71576.p1 GENE.R_Transcript_71576~~R_Transcript_71576.p1 ORF type:complete len:793 (+),score=109.56,mit_SMPDase|PF14724.2|0.00011,mit_SMPDase|PF14724.2|3.3e-05,mit_SMPDase|PF14724.2|0.48 R_Transcript_71576:267-2645(+)
MTPPPQPSYALDSHSKPSDLATKILNANTPSQITAVISAIESHLSSHSPDQNRHFFSLAFPTLICKFFGFDDSLSPQQQQQQQQPPSTGWIDTVSSSNDSELSGKVFKLLSPNGTLMNSILSVDRLSLVKYVFPVERLPVWVRFMLSSEKESRILSDLRVLFKGRIKEDEIKGTFQVQLNVFEYFMFWFAYYPVCRGNSDKHRGAVLVSSSRKFRLENWTSSISVLASGGSKRGTEQKIECNLYLKLLYAYLRSFVPMNDLNAHHQPYRSSLLHYSTSYDDSVLLRAESLVDTLVHYWLVDNDFSPLAVNMCKSFGISFPFRTVLGETPPASGLGEVVRLFVKYLNLSAVVAAEGSSQVEFSGNLKTREVGSVLPSLPLGGSWNLYIQRPLYRFILRTFLFCPVESSMKNVSEVFSVWVSYIEPWRLSKEEFAELDGKVDGSNKSLDGGQGNQLQYSAIWQGYVLSNYLFYSSLVMHFIGFAHKFLHSDAEMIVQMVSKIIDILTSSTELLELVKNVDTVFHTKNPGSGKSMLNSLSKFVPQIREQLQDWEDGLSESDADGSLLHENWNRDLRLFGDGEDGGQQLLQLLILRAETELSAIAGDNLANNLQCLASLKSRLRYLFGDHVVKQSPVSPRMGQQQRYRDELFNPRRLGNGSISNVKYKGDWMRRPISDDEVAWLAKLLIQLSSWLNESLGLYQGEGAHTNANGTFSYVEVPVDVVNEYGMSDSIRVMLYSISSWFCSLRLAIARVMIRHGLKVNLRFFARKWFVMMVLVFALFNMLRRAFSRTPIT*

Click here to download the sequence:
Link to NCBI Protein BLAST