Transcript Information: R_Transcript_71581.p1


Annotated TAIR IDAT4G15093.1
Annotated Gene Namecatalytic LigB subunit of aromatic ring-opening dioxygenase family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8618454-8619472 | Forward length=269
E-Value6.1E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.017280166801
Replicate 221.074644820837
Replicate 326.069234950845
Condition 2: 8 Hour
Replicate 133.713746886319
Replicate 245.389252692556
Replicate 355.132130764907
Condition 3: 24 Hour
Replicate 123.814441825753
Replicate 220.327048305868
Replicate 322.704410085662


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71581.p1 GENE.R_Transcript_71581~~R_Transcript_71581.p1 ORF type:complete len:268 (+),score=61.28,LigB|PF02900.14|3.2e-57 R_Transcript_71581:240-1043(+)
ATGGGTGAGAAAGAATTGATCAAGGAGACATTCTACTTATCTCATGGGACACCAATGTTGACCATTGATGAGACAATTGAAGCAAGGAGCTTCTTTCAGGGATGGAAAGAGAAAGTCTACTCAAAGAAGCCAAAGTCCATTCTTGTGGTATCTGCTCACTGGGAAACTCATGTTCCCACTGTCAATGCTGTTGATCACTCCGATCTCATCTATGATTTTGGTGGCTTCCCAGCTCGGATGTACCAGATCAAGTATCCATCACCTGGGGCTCCAGATTTGGGGAGAAGGGTACAAGAACTTCTCACCGAATCAGGGTTCGAATGTGCAGTAGATAGGAAGCGCGGACTTGACCATGCCTCATGGGTGCCTCTCATGTTCATGTACCCTGAGGCCAATATCCCCGTTTGTCAGCTTTCTGTTCAATCTCACTTGGATGGTACACACCACTATAAGTTGGGAAGAGCATTGGCCCCTCTTAAGGAGGAAGGTGTCCTTATCATTGGCTCTGGAAGTGCTGTACATCCTTCTAACAACACCCCTCATTGTTACGAAGGAGTTGCTCCTTGGGCTGCTGAGTTTGATAATTGGCTGGAAGGAGCTCTAATTAGTGGAAGGTATGAAGATGTGAATAATTATCAAGCAAAAGCCCCTAACTGGAAAGTAGCACATCCTTGGCCAGAGCACTTCTACCCATTGCATGTAGCCATGGGTGCTTCTGGTGAAAACTCCAAGGCAGAGCTGATTCACCGCAGCTGGGACCATGGTACGCTGGGCTACGCCTCATACAAGTTCACTTCCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71581.p1 GENE.R_Transcript_71581~~R_Transcript_71581.p1 ORF type:complete len:268 (+),score=61.28,LigB|PF02900.14|3.2e-57 R_Transcript_71581:240-1043(+)
MGEKELIKETFYLSHGTPMLTIDETIEARSFFQGWKEKVYSKKPKSILVVSAHWETHVPTVNAVDHSDLIYDFGGFPARMYQIKYPSPGAPDLGRRVQELLTESGFECAVDRKRGLDHASWVPLMFMYPEANIPVCQLSVQSHLDGTHHYKLGRALAPLKEEGVLIIGSGSAVHPSNNTPHCYEGVAPWAAEFDNWLEGALISGRYEDVNNYQAKAPNWKVAHPWPEHFYPLHVAMGASGENSKAELIHRSWDHGTLGYASYKFTSR*

Click here to download the sequence:
Link to NCBI Protein BLAST