Transcript Information: R_Transcript_71588.p1


Annotated TAIR IDAT3G52850.1
Annotated Gene Namevacuolar sorting receptor Homolog 1
Annotated Gene Symbol(s)VSR1, BP-80, ATELP, BP80, BP80B, ATELP1, ATVSR1, G
Annotation TypeOrtholog
Chromosome Positionchr3:19587999-19591690 | Forward length=623
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.07939872694
Replicate 210.681160750605
Replicate 313.54074979931
Condition 2: 8 Hour
Replicate 115.871186629831
Replicate 217.931230129382
Replicate 324.163792268027
Condition 3: 24 Hour
Replicate 117.75500780843
Replicate 215.728790017052
Replicate 317.447726557067


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71588.p1 GENE.R_Transcript_71588~~R_Transcript_71588.p1 ORF type:complete len:631 (+),score=131.75,PA|PF02225.18|5e-13 R_Transcript_71588:499-2391(+)
ATGAAGAAAAAGGCAGGATTTTGGGGGACAATTTGGTCTTTTCTTGTGATCATGATGATGGTAGCTAGGCCCTGTTTGGGGAGGTTTGTGGTGGAGAAAAACAGCTTAAGGGTGACATCACCAAGCTCATTAAAAGGTCTTTATGAATGTGCAATTGGGAATTTTGGGGTTCCTCAGTATGGAGGTACAATGGGTGGAATTGTGGTTTATCCTAAATCTAATCAAAAGGCTTGTAAACCTTTCTCTGATGGTGATATTACCTTCAATTCTAAGCCTGGTGGTTTGCCTGTCTTTATTCTCATTGATCGTGGTGAATGTTATTTTACCTTGAAAGCGTGGAATGCGCAGAAAGGTGGAGCAGCTGCTGTCCTTGTAGCAGATGATAGAATTGAGCCCTTGATTACCATGGACAACCCTGAAGAAGGAGATTCTCAGGATGATTATGTACAGAATATCACCATTCCGTCAGCACTTATTAGCAAGGCTGTTGGAGATAAGCTCAAGAGAGCTATATCAAGTGGTGAGGCTGTGAACATCAAACTTGACTGGAGGGAGACACTTCCACATCCTGATGAGCGAGTTGAGTACGAATTTTGGACCAATAGCAATGATGAGTGTGGGCCAAAGTGTGATGCCCAAATAGAATTTGTGAAGGAATTCAAAGGAGCTGCTCAGATACTAGAAAAGAATGGATATACCCATTTTACACCTCACTATATCACGTGGTATTGTCCTGAAGCTTTTATATTGAGCAAACAGTGCACATCTCAATGTATCAATCATGGAAGGTATTGTGCACCAGACCCTGAGCAAGATTTCAGCAGAGGTTATGATGGGAAGGATGTTGTGCTCCAGAACCTACGCCAAGCTTGCTTGTTCAAAGTGGCCAATGAAAGTGGAAAGCCTTGGCTGTGGTGGGACTATGTTTCTGATTTTGCAATCCGTTGCCCTATGAAAGCGATTAAGTACACAAAAGAGTGTGCTGATCAAGTCCTCCGTTCTCTTGGTGTTGATCTTTCAAAAGTAGACGAATGTATTGGAGACCCTGACTCTGATGTAGAAAATCCAGTCCTTAAGGCAGAGCAGGAGGCACAGATTGGTCATGGTCCACGGGGAGACGTGACTATATTGCCAACTCTTGTAGTTAACAACAGGCAGTATAGAGGCAAATTGGTGAAGAATGCTGTTCTCAAGGCAATCTGTTCAGGTTTTGAAGAGACAACTGAACCATCCCTCTGTTTGACCCCAGATATAGAAACAAATGAATGCCTGGAGAGCAATGGTGGATGCTGGGAGGATAAGGCTTCCAATCTGACTGCATGCAGGGATACATATCGAGGCAGAGTCTGTGAATGTCCTACAGTGCAAGGAGTCAGATTTGTTGGTGATGGTTATGTTCATTGTGAAGCTTCTGGGCTCTTACGCTGTAAAATTAACAACGGTGGATGTTGGAAGGATACTCGTGGTGGCAGGACATATTCTGCTTGTGAAGATGAGCGCACACATGGTTGCAAATGTCCACCAGGATTCAAGGGTGATGGAGTAAACTCTTGTGAAGATGTTGATGAGTGCAAGGAAAAACTAGCCTGCCAATGCCCAGAATGTAACTGTAAGAACACTTGGGGAAGTTATGAATGCACTTGCGGTAACGGTTTGCTGTACATGCAAGAGCACGATTTATGCATAAGTATGAATGGCAGTTCAGGTGCCGGCTGGGGCTTTGTGTGGGTGGTAATTCTGGGTTTGGCTGCTGCTGGGATAGGCGGATATGCTGTCTACAAGTACAGGATTCGGAGGTACATGGACTCGGAAATAAGGGCAATTATGGCTCAGTACATGCCTCTCGATAATCAGGTGGAGATCTCGAGTCACAATCCCCAAGAAGATATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71588.p1 GENE.R_Transcript_71588~~R_Transcript_71588.p1 ORF type:complete len:631 (+),score=131.75,PA|PF02225.18|5e-13 R_Transcript_71588:499-2391(+)
MKKKAGFWGTIWSFLVIMMMVARPCLGRFVVEKNSLRVTSPSSLKGLYECAIGNFGVPQYGGTMGGIVVYPKSNQKACKPFSDGDITFNSKPGGLPVFILIDRGECYFTLKAWNAQKGGAAAVLVADDRIEPLITMDNPEEGDSQDDYVQNITIPSALISKAVGDKLKRAISSGEAVNIKLDWRETLPHPDERVEYEFWTNSNDECGPKCDAQIEFVKEFKGAAQILEKNGYTHFTPHYITWYCPEAFILSKQCTSQCINHGRYCAPDPEQDFSRGYDGKDVVLQNLRQACLFKVANESGKPWLWWDYVSDFAIRCPMKAIKYTKECADQVLRSLGVDLSKVDECIGDPDSDVENPVLKAEQEAQIGHGPRGDVTILPTLVVNNRQYRGKLVKNAVLKAICSGFEETTEPSLCLTPDIETNECLESNGGCWEDKASNLTACRDTYRGRVCECPTVQGVRFVGDGYVHCEASGLLRCKINNGGCWKDTRGGRTYSACEDERTHGCKCPPGFKGDGVNSCEDVDECKEKLACQCPECNCKNTWGSYECTCGNGLLYMQEHDLCISMNGSSGAGWGFVWVVILGLAAAGIGGYAVYKYRIRRYMDSEIRAIMAQYMPLDNQVEISSHNPQEDI*

Click here to download the sequence:
Link to NCBI Protein BLAST