Transcript Information: R_Transcript_71695.p1


Annotated TAIR IDAT2G38420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16091093-16092454 | Forward length=453
E-Value1.7E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1895673302632
Replicate 22.0172916086247
Replicate 33.2788075382728
Condition 2: 8 Hour
Replicate 12.4485864947245
Replicate 23.2445201102897
Replicate 34.7692467120232
Condition 3: 24 Hour
Replicate 14.1414083626447
Replicate 22.8109643684069
Replicate 35.3646335016905


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71695.p1 GENE.R_Transcript_71695~~R_Transcript_71695.p1 ORF type:complete len:510 (+),score=68.59,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|9.3e-07,PPR_2|PF13041.2|6.2e+03,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|8.2e-06,PPR_2|PF13041.2|5.7e-17,PPR_2|PF13041.2|5.2e-10,PPR_2|PF13041.2|0.89,PPR_2|PF13041.2|80,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|9.4e-05,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|55,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|3.1e-07,PPR_1|PF12854.3|8.4e-08,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|0.98,PPR|PF01535.16|0.0035,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|0.00058,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.73,PPR|PF01535.16|0.00017,PPR|PF01535.16|9.4e-06,PPR|PF01535.16|0.12,PPR|PF01535.16|6.5,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.88,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.1 R_Transcript_71695:51-1580(+)
ATGGTGCTACGACCCTCAACAGCCAAAGCAATCCGCAGCACATTCCTAAGAAAGAAAAGAAAATTTCCACATTCCCCTTGCAAAACCCAATGGCACTTCACTTTTTCTCAACAACAAGCCCTTCAAAATCTCAAAAAATTATCCCTTCAAAATTCACCCGTTCAACAAAACCCCCAAAACCCATCTAAAACCCTACCTTTCCTTCTCAAATCCCGAATTGATTCCTTCAACTCCTATAACTGTGAACCCACCCCGACTGCCTATCAATTCATCATCAAAACCCTAATTCAAAATTCCCAATTCACTGAACTCAACCATGTTCTCTCTCACCTCCAAAAGGTTGAAAATTTCGAAACCCCAGAAAGTATTTTGGTTAATTTGATTAGGGTTTATGGAAAAAAGGGTATGATTCATGAAGCTATTGATTTGTTCTTCAAGATTCCCTCTTTCAGGTGTGTTCCTACTGTGAATTCACTCAATTCATTGATTTTGATATTATGTAGAAATAGAGAATTTTTGAGATTTGTTCCTCAATTGTTGTTAAAGAGTAGGGTTCTGAATATTCAGATCGAGGAATCGAGTTTTTCGATTTTGATTAGTACCCTTTGTAGGATTGGTAGGGTTGATTATGGTCTTAAGTTGCTCAAGTATATGATTGATGATGGCTTTAACCCTGATGACAAAATTTGTTCTTTGGTATTGTCATCATTGTGTAAGCAAAAAGGTATGACTAGTTTTGAGGTAATTAATGTTATGGAGGATATGAAAGGGTTTGGTTTTTGCCTCGATAGAGCTGATTTTTACAATGTGATTAAGTTCTTAGTTCAACAAGGAAAGGGTAAAGATGCATTTGATGTTCTGTGTGAAATGAAAAGGGAAGGTATCAAGCCCGACATTGCGTGCTATACAATGGTTTTGCACGGTCTCGTTGAAGAAGGGGTGTTTCCTAGAGTAGAAGAGTTGTTTGATGAAATTCTCGTGTTTGGTTTGGTTCCAGATGTGCACACTTATAACGCGTACATAAATGGGTTATGCAAACAAAAGAAAACTGATTCTGCTTGTGCAATGATTAGTTATATGCAGCAACTTGGTTGCCAACCTGATTTGGTTACTTACAAGACAGTCTTGGAAGCATATTGTAAGTTCGGGGAATTGAGAAGGGCAAGGGAAATTTGGAAGGAGATTAAATGGAAAGGCGTGGAATTAGATTTGGAAACATATAGGATAATGATCGAAGCATTTGTCACTCGAGGTGAAGCTAGTGAAGCTTGCAATATGTTGGAAGAATTGCTTTCCAATAGTTCAATTGCTATGTCTTCTTCACTTGATGATATCATAGGTAGTATGTGCCGTGGGGGACTTGTTTCAGAGGCACTAAACACATTTGAAAAAGCTTATTCTTGTGATGATGTTCCTGGGTGTAGGGCTTGGGAAGCACTTCTGCTCAGGTTAAGTGGTTACGAGACAGATTTGTTGGCTAATTTGGTAAACTTACATGAGGGGTTGGCTTCTAAACCGAAGCAAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71695.p1 GENE.R_Transcript_71695~~R_Transcript_71695.p1 ORF type:complete len:510 (+),score=68.59,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|9.3e-07,PPR_2|PF13041.2|6.2e+03,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|8.2e-06,PPR_2|PF13041.2|5.7e-17,PPR_2|PF13041.2|5.2e-10,PPR_2|PF13041.2|0.89,PPR_2|PF13041.2|80,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|9.4e-05,PPR_1|PF12854.3|6.3e+02,PPR_1|PF12854.3|55,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|3.1e-07,PPR_1|PF12854.3|8.4e-08,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|0.98,PPR|PF01535.16|0.0035,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|0.00058,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|1.5e+03,PPR|PF01535.16|0.0083,PPR|PF01535.16|0.73,PPR|PF01535.16|0.00017,PPR|PF01535.16|9.4e-06,PPR|PF01535.16|0.12,PPR|PF01535.16|6.5,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.88,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.1 R_Transcript_71695:51-1580(+)
MVLRPSTAKAIRSTFLRKKRKFPHSPCKTQWHFTFSQQQALQNLKKLSLQNSPVQQNPQNPSKTLPFLLKSRIDSFNSYNCEPTPTAYQFIIKTLIQNSQFTELNHVLSHLQKVENFETPESILVNLIRVYGKKGMIHEAIDLFFKIPSFRCVPTVNSLNSLILILCRNREFLRFVPQLLLKSRVLNIQIEESSFSILISTLCRIGRVDYGLKLLKYMIDDGFNPDDKICSLVLSSLCKQKGMTSFEVINVMEDMKGFGFCLDRADFYNVIKFLVQQGKGKDAFDVLCEMKREGIKPDIACYTMVLHGLVEEGVFPRVEELFDEILVFGLVPDVHTYNAYINGLCKQKKTDSACAMISYMQQLGCQPDLVTYKTVLEAYCKFGELRRAREIWKEIKWKGVELDLETYRIMIEAFVTRGEASEACNMLEELLSNSSIAMSSSLDDIIGSMCRGGLVSEALNTFEKAYSCDDVPGCRAWEALLLRLSGYETDLLANLVNLHEGLASKPKQK*

Click here to download the sequence:
Link to NCBI Protein BLAST