Transcript Information: R_Transcript_71725.p1


Annotated TAIR IDAT2G20000.1
Annotated Gene NameCDC27 family protein
Annotated Gene Symbol(s)HBT, CDC27b
Annotation TypeOrtholog
Chromosome Positionchr2:8632324-8636900 | Reverse length=744
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2089486749355
Replicate 26.1425346962574
Replicate 36.8537446265084
Condition 2: 8 Hour
Replicate 14.4608557151231
Replicate 26.1849247645832
Replicate 35.9620316798346
Condition 3: 24 Hour
Replicate 18.0291267299018
Replicate 26.1590483604006
Replicate 39.3139168880414


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71725.p1 GENE.R_Transcript_71725~~R_Transcript_71725.p1 ORF type:complete len:752 (+),score=166.85,TPR_1|PF00515.24|9.6e+02,TPR_1|PF00515.24|0.002,TPR_1|PF00515.24|15,TPR_1|PF00515.24|3e-07,TPR_1|PF00515.24|9.2,TPR_1|PF00515.24|3.2e-07,TPR_1|PF00515.24|18,TPR_1|PF00515.24|8.1,TPR_1|PF00515.24|0.077,TPR_2|PF07719.13|2.5e+03,TPR_2|PF07719.13|1.8e+03,TPR_2|PF07719.13|0.00011,TPR_2|PF07719.13|3.2e+03,TPR_2|PF07719.13|2.4,TPR_2|PF07719.13|0.001,TPR_2|PF07719.13|1.6e+02,TPR_2|PF07719.13|1.2e-05,TPR_2|PF07719.13|7.7,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.24,TPR_11|PF13414.2|24,TPR_11|PF13414.2|0.0014,TPR_11|PF13414.2|0.0006,TPR_11|PF13414.2|6.3e-05,TPR_11|PF13414.2|4e-06,TPR_11|PF13414.2|3.1e-08,TPR_11|PF13414.2|0.00045,TPR_8|PF13181.2|4e+03,TPR_8|PF13181.2|1.1e+03,TPR_8|PF13181.2|0.0021,TPR_8|PF13181.2|4.9e+02,TPR_8|PF13181.2|0.022,TPR_8|PF13181.2|1.7e+02,TPR_8|PF13181.2|0.0091,TPR_8|PF13181.2|9.5,TPR_8|PF13181.2|2.8,TPR_8|PF13181.2|0.0011,TPR_12|PF13424.2|2.5e+02,TPR_12|PF13424.2|0.25,TPR_12|PF13424.2|0.044,TPR_12|PF13424.2|0.0043,TPR_12|PF13424.2|0.0007,TPR_12|PF13424.2|9.6e-08,TPR_12|PF13424.2|0.0064,ANAPC3|PF12895.3|1.6e-16,ANAPC3|PF12895.3|2.2e+02,ANAPC3|PF12895.3|1.5e+03,ANAPC3|PF12895.3|1.3,ANAPC3|PF12895.3|0.00086,ANAPC3|PF12895.3|0.04,TPR_19|PF14559.2|9.3,TPR_19|PF14559.2|72,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|3.5e+03,TPR_19|PF14559.2|31,TPR_19|PF14559.2|2,TPR_19|PF14559.2|0.02,TPR_19|PF14559.2|0.00059,TPR_14|PF13428.2|5.8e+02,TPR_14|PF13428.2|4.3e+03,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|9.1e+02,TPR_14|PF13428.2|9.1,TPR_14|PF13428.2|1.4e+02,TPR_14|PF13428.2|15,TPR_14|PF13428.2|2,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|1.9e+03,TPR_10|PF13374.2|7.8,TPR_10|PF13374.2|1.1e+03,TPR_10|PF13374.2|9.6e+03,TPR_10|PF13374.2|4.3,TPR_10|PF13374.2|1.9e+02,TPR_10|PF13374.2|0.0013,TPR_10|PF13374.2|69,TPR_17|PF13431.2|1.5e+03,TPR_17|PF13431.2|3.8e+03,TPR_17|PF13431.2|7.6e+03,TPR_17|PF13431.2|14,TPR_17|PF13431.2|4.5e+03,TPR_17|PF13431.2|9.9,TPR_17|PF13431.2|0.67,TPR_17|PF13431.2|0.035,TPR_17|PF13431.2|7e+02,TPR_16|PF13432.2|6.1e+03,TPR_16|PF13432.2|27,TPR_16|PF13432.2|98,TPR_16|PF13432.2|5e+02,TPR_16|PF13432.2|57,TPR_16|PF13432.2|9.3e-05,TPR_16|PF13432.2|0.086,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|8.2e+02,TPR_7|PF13176.2|6.1e+03,TPR_7|PF13176.2|0.81,TPR_7|PF13176.2|5.2e+02,TPR_7|PF13176.2|0.6,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|3.8e+03,TPR_7|PF13176.2|2.3e+02,TPR_7|PF13176.2|6.7,TPR_15|PF13429.2|1.2e+02,TPR_15|PF13429.2|8.6,TPR_15|PF13429.2|0.057,TPR_15|PF13429.2|26 R_Transcript_71725:175-2256(+)
ATGGCTCAATCCCGCTACCTTTTTGCTCTATCTTGCTTCCAGATGGGTCTTTTAGGTGAAGCAGAAAAAGCATTGTCCCCTACTCATGAGCCTGGTTTGGAGGTCCCGAATGGTGCGGCTGGGCATTATCTTCTTGGTCTCATTTATAGGTATACTGATAGAAGGAAGAGTGCTGTTAATCACTTCAAGCAGGCTTTGTCTGTGGACCCATTGTTTTGGGCTGCATTTGAGGAACTGTGTATATTGGGTTCTTCTGAAGAAGCAGCTGCAGTTTTTGGTGAAGCAGCTGTTCTTGCCATACAGAAGCAGCAACAACAGCAGCACCCATTAACTTCTCAGAACTTTGTTGCTTGCAGTGAAGATCTTAGTCAAGTTTCTGCTAAGGGTTTGGAAGATGCAAGTCCTAGACATCTGAAAAATTTCCACAGCAATAGTTTAAAAGATGCTCCTGGAAATTATCAGGGAAGTGTTGCATCTTCAGCTGCTATCAACCAACCTCCTAATTGTGTCCCTTCTAACCTGTCATTTTACAATACGCCTTCACCCATGGCCTCTCAGTTGTCTGGCATAGCTCCACCACCTGTTTGTAGGAATGTACAGCAAAATACTGCACCTGCAAGCAGTGAAAGCTCCCCAAGATCAACTGTAAATACAACTCTTCAGGCCCCCCGAAGAAAGTTTGTGGATGAAGGAAAATTGCGGAAGATATCTGGTAGGTTATTTTCGGATTCTGGTCCTAGAAGAAGTACACGGCTTGCTGGGGAAGCTGGAGGAAACGCCAACTCAACTACCACAACATCGACTGGGAATGGAACAAGTCACTCTACAAAATATTTGGGAAGTTCTAGGTTGAGCAATGCAGGGTTACGTTCTGTGACATTTCGTAAAGGACAGGCATGGTCAAGTGAAAGTTTTGAAGAAGGCATTCGCCATGATGCATTAGATGACTCTCGTTTAAGCTCGCAAGCAACTGCTAGTCCATCAACTTCATGTGATGCTAGATCTGCTGAACAGGATGGTGGAGCCGTGAGTTCTAATAGGACAGATTGTGATGGTTCTAGAACTCACAATGCTGCCTTAGAAATTTTGGGCCTGTGGAGGCTCTTTGGTGAAGGCTACAGACTTTCATGCCTGTACAAGTGTCAGGATGCACTAGATATCTATCAAAGACTTCCCCCTAAGCATTACAATACTGGATGGGTGCTTTCCCAGGTTGGGAGAGCATACTTTGAATTAGTTGATTATTCAGAAGCTGATCGTGCCTTCAGCCTGGCTCGCCGCCTATGTCCTTATAGTTTAGATGGAATGGATGTCTACTCCACCGTACTTTATCATCTGAAGGAAGATATGAAACTAAGTTACCTGGCTCAGGAACTGCTGTCAACTGACCGCTTGGCCCCTCAAACATGGTGTGCCATGGGAAATTGCTACAGCTTGCAGAAAGATCACGATACAGCTTTGAAGAATTTCCAGCGAGCTGTACAGGTAGATTCAAGGTTTGCATATGCACATACACTCTGTGGTCATGAGCATGTTGCTTTGGAAGATTTTGAGAATGGAGTACGAAGCTTTCAAAGTGCATTGAGTGTTGATTCAAGACACTACAATGCATGGTATGGTCTTGGAATGGTCTACCTTCGGCAAGAGAAGTTTGAATTTGCTGAACATCATTTCCGAACGGCGTTCCAGATCAACCCTCGCTCTTCTGTGATCATGTCATATCTTGGGACAGCTCTGCATGCTCTAAAGAGAAATGAGGAAGCTCTGATGATGATGGAGAGGGCCATTGCGGCTGATAAAAAGAATCCTCTCCCCATGTACCAAAAGGCTATTATATTATCTAGCATGGACAACTATGAGGAAGCTTTACTGGTCCTCGAAGAGCTCAAGGAATATGCACCACGTGAATGTATTATCTATGCCTTGATGGGTAAGATTTATAAGCGAAAGAACATGTATCATAAAGCCATGCTTCATTTTGGACTTGCCTTGGACTTGAAGCCATCAGCAACAGATGTTGCTACCATAAAGGCTGCTATTGAGAAATTGCATGTACCAGACGACTTAGATGACAGTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71725.p1 GENE.R_Transcript_71725~~R_Transcript_71725.p1 ORF type:complete len:752 (+),score=166.85,TPR_1|PF00515.24|9.6e+02,TPR_1|PF00515.24|0.002,TPR_1|PF00515.24|15,TPR_1|PF00515.24|3e-07,TPR_1|PF00515.24|9.2,TPR_1|PF00515.24|3.2e-07,TPR_1|PF00515.24|18,TPR_1|PF00515.24|8.1,TPR_1|PF00515.24|0.077,TPR_2|PF07719.13|2.5e+03,TPR_2|PF07719.13|1.8e+03,TPR_2|PF07719.13|0.00011,TPR_2|PF07719.13|3.2e+03,TPR_2|PF07719.13|2.4,TPR_2|PF07719.13|0.001,TPR_2|PF07719.13|1.6e+02,TPR_2|PF07719.13|1.2e-05,TPR_2|PF07719.13|7.7,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.24,TPR_11|PF13414.2|24,TPR_11|PF13414.2|0.0014,TPR_11|PF13414.2|0.0006,TPR_11|PF13414.2|6.3e-05,TPR_11|PF13414.2|4e-06,TPR_11|PF13414.2|3.1e-08,TPR_11|PF13414.2|0.00045,TPR_8|PF13181.2|4e+03,TPR_8|PF13181.2|1.1e+03,TPR_8|PF13181.2|0.0021,TPR_8|PF13181.2|4.9e+02,TPR_8|PF13181.2|0.022,TPR_8|PF13181.2|1.7e+02,TPR_8|PF13181.2|0.0091,TPR_8|PF13181.2|9.5,TPR_8|PF13181.2|2.8,TPR_8|PF13181.2|0.0011,TPR_12|PF13424.2|2.5e+02,TPR_12|PF13424.2|0.25,TPR_12|PF13424.2|0.044,TPR_12|PF13424.2|0.0043,TPR_12|PF13424.2|0.0007,TPR_12|PF13424.2|9.6e-08,TPR_12|PF13424.2|0.0064,ANAPC3|PF12895.3|1.6e-16,ANAPC3|PF12895.3|2.2e+02,ANAPC3|PF12895.3|1.5e+03,ANAPC3|PF12895.3|1.3,ANAPC3|PF12895.3|0.00086,ANAPC3|PF12895.3|0.04,TPR_19|PF14559.2|9.3,TPR_19|PF14559.2|72,TPR_19|PF14559.2|3.8e+02,TPR_19|PF14559.2|3.5e+03,TPR_19|PF14559.2|31,TPR_19|PF14559.2|2,TPR_19|PF14559.2|0.02,TPR_19|PF14559.2|0.00059,TPR_14|PF13428.2|5.8e+02,TPR_14|PF13428.2|4.3e+03,TPR_14|PF13428.2|0.55,TPR_14|PF13428.2|9.1e+02,TPR_14|PF13428.2|9.1,TPR_14|PF13428.2|1.4e+02,TPR_14|PF13428.2|15,TPR_14|PF13428.2|2,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|1.9e+03,TPR_10|PF13374.2|7.8,TPR_10|PF13374.2|1.1e+03,TPR_10|PF13374.2|9.6e+03,TPR_10|PF13374.2|4.3,TPR_10|PF13374.2|1.9e+02,TPR_10|PF13374.2|0.0013,TPR_10|PF13374.2|69,TPR_17|PF13431.2|1.5e+03,TPR_17|PF13431.2|3.8e+03,TPR_17|PF13431.2|7.6e+03,TPR_17|PF13431.2|14,TPR_17|PF13431.2|4.5e+03,TPR_17|PF13431.2|9.9,TPR_17|PF13431.2|0.67,TPR_17|PF13431.2|0.035,TPR_17|PF13431.2|7e+02,TPR_16|PF13432.2|6.1e+03,TPR_16|PF13432.2|27,TPR_16|PF13432.2|98,TPR_16|PF13432.2|5e+02,TPR_16|PF13432.2|57,TPR_16|PF13432.2|9.3e-05,TPR_16|PF13432.2|0.086,TPR_16|PF13432.2|1.4e+02,TPR_16|PF13432.2|8.2e+02,TPR_7|PF13176.2|6.1e+03,TPR_7|PF13176.2|0.81,TPR_7|PF13176.2|5.2e+02,TPR_7|PF13176.2|0.6,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|3.8e+03,TPR_7|PF13176.2|2.3e+02,TPR_7|PF13176.2|6.7,TPR_15|PF13429.2|1.2e+02,TPR_15|PF13429.2|8.6,TPR_15|PF13429.2|0.057,TPR_15|PF13429.2|26 R_Transcript_71725:175-2256(+)
MAQSRYLFALSCFQMGLLGEAEKALSPTHEPGLEVPNGAAGHYLLGLIYRYTDRRKSAVNHFKQALSVDPLFWAAFEELCILGSSEEAAAVFGEAAVLAIQKQQQQQHPLTSQNFVACSEDLSQVSAKGLEDASPRHLKNFHSNSLKDAPGNYQGSVASSAAINQPPNCVPSNLSFYNTPSPMASQLSGIAPPPVCRNVQQNTAPASSESSPRSTVNTTLQAPRRKFVDEGKLRKISGRLFSDSGPRRSTRLAGEAGGNANSTTTTSTGNGTSHSTKYLGSSRLSNAGLRSVTFRKGQAWSSESFEEGIRHDALDDSRLSSQATASPSTSCDARSAEQDGGAVSSNRTDCDGSRTHNAALEILGLWRLFGEGYRLSCLYKCQDALDIYQRLPPKHYNTGWVLSQVGRAYFELVDYSEADRAFSLARRLCPYSLDGMDVYSTVLYHLKEDMKLSYLAQELLSTDRLAPQTWCAMGNCYSLQKDHDTALKNFQRAVQVDSRFAYAHTLCGHEHVALEDFENGVRSFQSALSVDSRHYNAWYGLGMVYLRQEKFEFAEHHFRTAFQINPRSSVIMSYLGTALHALKRNEEALMMMERAIAADKKNPLPMYQKAIILSSMDNYEEALLVLEELKEYAPRECIIYALMGKIYKRKNMYHKAMLHFGLALDLKPSATDVATIKAAIEKLHVPDDLDDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST