Transcript Information: R_Transcript_71788.p1


Annotated TAIR IDAT5G60980.2
Annotated Gene NameNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24543988-24546027 | Forward length=460
E-Value1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.895013884556
Replicate 222.514105265669
Replicate 327.115505648458
Condition 2: 8 Hour
Replicate 119.028172157799
Replicate 221.822065411277
Replicate 324.001677898644
Condition 3: 24 Hour
Replicate 123.234407314785
Replicate 223.317457441544
Replicate 324.986265290163


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71788.p1 GENE.R_Transcript_71788~~R_Transcript_71788.p1 ORF type:complete len:332 (+),score=104.07,RRM_1|PF00076.18|9.9e-14,RRM_6|PF14259.2|2.6e-10 R_Transcript_71788:2089-3084(+)
ATGGAAGATGGGACGACAGAAGCGACCCCTGTTTCAGCTAATGGCATTGAAAATGCACAAGCAGCTCCTCCGCCTCCAGAGCCAGAGCAGCCTTCTCATGTTTCAGACCATCCTGGTCAAGGTCCTGAATCTTCATTAGAGGAAGAACTTAACGATGAGGCAGAAGTATGTGATCCATCAGATAATGAGGATGGATCAATTACTGAAGAAGAGATTGTTGAGCCACCAGCTCCTGTGAATCAAAATGAACAGGTCATGGCAACTCCCATGCCATCTGCCTCTCCAGATGAGGCACGCAAGAAATCATATGCAGAAATGCTGAAGGCTATGAAGGCCAATCCAGCGCCTGTTGCGGCAAAAACACCTGCTACCAGTGTTAAGGTTAAACCTCCAAGCAGTGACCAGGAAGCAATTGTTTCTGCAAAACCTGCTCCAGTACATGAGGCACCAGCTTCAACTAGTGAAAGCGGCGCTGAAAAAAGCAACAATATTGAGGAAGCTGAAGGTCACTCCATTTATGTACGGAATTTGCCTCAAAATGCAACTCCTGCTCAACTTGAGGAGATCTTTTCAAAGTTTGGGCTAATCAAGGAAGGTGGCATCCAAGTGAGAAGTAACAAGCAAGGATTTTGCTTTGGTTTTGTAGAGTTTGAATATGTGAGCTCTATGAAATCTGCTATTGAGGCCTCTCCCTTTACAATGGCAAATCGTAAAGCTGTTGTTGAAGAAAAGAGAACTACAACTCGAGTCTCTTCTGGGCCGAGCACAAACAGTGGAAGGGGAAGATACCCTTCATCAAGGGGTGGCTTCCGCAACGAAAACTTCAGAGGCCGTGGAAACTTTGGTGGAGGCCGAGGTTATGGCAGAAGCGACTTCAGAAGTCAGGGCGAGTTTTCAAGCCGACCCAGGGGTTCAGGCGGACGGGGCTCCGAGGGTTATCAACGAGCTGATCAGAATGGAAGTGGAAACACTGGTCGTCAAGGTGTACCAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71788.p1 GENE.R_Transcript_71788~~R_Transcript_71788.p1 ORF type:complete len:332 (+),score=104.07,RRM_1|PF00076.18|9.9e-14,RRM_6|PF14259.2|2.6e-10 R_Transcript_71788:2089-3084(+)
MEDGTTEATPVSANGIENAQAAPPPPEPEQPSHVSDHPGQGPESSLEEELNDEAEVCDPSDNEDGSITEEEIVEPPAPVNQNEQVMATPMPSASPDEARKKSYAEMLKAMKANPAPVAAKTPATSVKVKPPSSDQEAIVSAKPAPVHEAPASTSESGAEKSNNIEEAEGHSIYVRNLPQNATPAQLEEIFSKFGLIKEGGIQVRSNKQGFCFGFVEFEYVSSMKSAIEASPFTMANRKAVVEEKRTTTRVSSGPSTNSGRGRYPSSRGGFRNENFRGRGNFGGGRGYGRSDFRSQGEFSSRPRGSGGRGSEGYQRADQNGSGNTGRQGVPK*

Click here to download the sequence:
Link to NCBI Protein BLAST