Transcript Information: R_Transcript_71869.p1


Annotated TAIR IDAT3G27170.1
Annotated Gene Namechloride channel B
Annotated Gene Symbol(s)CLC-B, ATCLC-B
Annotation TypeOrtholog
Chromosome Positionchr3:10024147-10026921 | Forward length=780
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.543647988623
Replicate 234.551532779237
Replicate 343.429130758505
Condition 2: 8 Hour
Replicate 119.540145013663
Replicate 225.408833517184
Replicate 325.574202323891
Condition 3: 24 Hour
Replicate 128.533681102091
Replicate 223.613065280618
Replicate 323.108208665721


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71869.p1 GENE.R_Transcript_71869~~R_Transcript_71869.p1 ORF type:complete len:807 (+),score=109.63,Voltage_CLC|PF00654.16|1.6e+02,Voltage_CLC|PF00654.16|1.5e-87,CBS|PF00571.24|2.5,CBS|PF00571.24|0.023 R_Transcript_71869:67-2421(+)
ATGGAAAATTCAAGCCAGTTAGATGAGAGAGAAGCAGAAGGTGAGAATGGAGATGCAGTACCAGATCTTGAAAACAGCTTCCTTGAGCAGCCTTTGCTCAAGAGAAACAGGACACTCTCTGCCAGTCATTTGGCTATGGTGGGTGCCAAGGTTTCTTACATCGAGAGCCTCGATTACGAGATCAACGAGAATGATCTGTTCAGACAAGATTGGAGAAGTCGATCCAAAATCCAAGTGTTGCAGTACATATTTTTGAAATGGAAACTAGCTTTTCTTATTGGACTTCTAACAGGGCTTATTGCCACACTCATCAATCTAGCTGTTGAGAATATTGCCGGCTACAAACTTCTTATTGTTTCTAACTATATTGAGCAGAAAAGGTATGTGATGGGGTTGATTATGTTGACAGGGTCGAACTTCATATTGACCCTGATTGCTACTGTCCTCGTCGTTTTCTTTGCTCCAACGGCTGCTGGGCCTGGTATTCCGGAAATTAAAGCTTATCTCAATGGTGTTGACACCCCAAACATGTTTGGTGCCCCGACATTGTTCGTCAAGATAATTGGGAGCATTGGAGCTGTATCTGCTGGCTTAGATCTTGGGAAAGAAGGACCATTGGTGCATATCGGAACCTGCATTGCTTCCTTACTCGGCCAGGGTGGGACAGAAAAGTATCGTCTCAAATGGCGTTGGCTTAGGTACATGAACAATGACAGGGATCGGAGGGATCTCATCACCTGCGGTTCTTCTTCCGGAGTGTGTGCTGCTTTCCGATCCCCAGTAGGAGGTGTCCTCTTTGCTCTAGAAGAAGTCGCAACTTGGTGGAGAAGCGCGCTCCTTTGGAGAACTTTCTTTAGCACGGCAGTTGTGGTTGTGGTGCTTAGGGCTTTCATTGAGTACTGTAGTTCTGGAAGATGTGGGCTCTTTGGCAATGGAGGGCTTATCATGTTTGATGTAAGCAATGTCACTGTGCGCTACCACATGACGGATATTATCCCTGTTGCCATTATAGGTCTAATTGGCGGAGTTCTTGGAAGCCTTTACAACTACCTGCTCCATAAGGTTCTCAGAGTTTATAGTCTTATTAATGAGAAGGGAAAATTAGCAAAGATTCTTCTGAGTCTTACAGTCTCGGTGTTTACCTCTGTGTGCATGTATGGCCTGCCTTTCCTTGTGAGTTGCACGAAATGCGATCCATCCCTTCGCATGTCTGTCTGTCCAACAACCGGAAGGACGGGGAACTTCAAGAAATTCAACTGTCCTGATGGCTACTACAATGACCTTGCCAGTTTACTCTTCTCTACCAACGATGATGCTGTTCGAAATATCTTCTCCACAAATACTCCGAAAGAATTTCACATGTTCCCTCTAGTAATCTACTTTGCACTCTACTGTATCTTGGGACTCTTCACCTTTGGCATTGCTGTCCCGTCTGGACTTTTCCTACCCATTATTCTCATGGGTTCTGCATATGGGCGATTGCTTGGCATTCTTATGGGAAGTTATACAAATATCGACCAAGGGCTTTTTGCTGTACTTGGTGCAGCCTCCCTTATGGCGGGCTCAATGAGGATGACTGTGTCACTTTGCGTCATTTTCCTTGAACTCACTAACAACCTGTTGCTACTCCCCATAACGATGCTTGTGCTTCTCATTGCAAAGTCTGTGGGAGACTGCTTCAATAAGAGTATATATGAGATCATTCTCGACCTCAAAGGCCTTCCTTTCTTAGATGCAAATCCCGAGCCATGGATGAGAAATATAACAGTTGGTGACCTTGCTGATGTGAAACCTCCATTAGTTAGTCTTCGTGGTATTGAGAAGGTATCCCGAATTGTGGAAGTGTTGAAGAACACCACACACAACGGTTTCCCTGTCATAGACGACAATACCCTGATAACAGTAGGGCAGGGCAGCACAAGGACAATGGAGCTACATGGATTAATTTTACGAGCACACCTTGTAGCTGTGCTGAAAAAGAAGTGGTTCCTACGAGAGCCCAGAAGAACGGAGGAATGGGAAGTTAGGGAGAAATTTACCTGGGTTGAGCTGGCTGAACGAGACACGAACTTTGAGCAAGTAGCCATATCAAAGCATGAAATGGAGATGTATGTTGATCTGCACCCTTTCACCAACAAAACTCCTTATACCGTGGTTGAAGACATGTCAGCAGCTAAGACAATGGTGCTCTTCAGGCAAGTTGCCCTTCGCCATTTGCTCGTTGTACCAAAGTATCAAGGAGCTGGGATATATCCTGTACTTGGAATCTTAACAAGGCAAGATTTGAGGGCCCACAATATCCAGAGTGTGTTCCCTCACCTAGCAAAGTCGAAGGGACGGGAAAAACAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71869.p1 GENE.R_Transcript_71869~~R_Transcript_71869.p1 ORF type:complete len:807 (+),score=109.63,Voltage_CLC|PF00654.16|1.6e+02,Voltage_CLC|PF00654.16|1.5e-87,CBS|PF00571.24|2.5,CBS|PF00571.24|0.023 R_Transcript_71869:67-2421(+)
MENSSQLDEREAEGENGDAVPDLENSFLEQPLLKRNRTLSASHLAMVGAKVSYIESLDYEINENDLFRQDWRSRSKIQVLQYIFLKWKLAFLIGLLTGLIATLINLAVENIAGYKLLIVSNYIEQKRYVMGLIMLTGSNFILTLIATVLVVFFAPTAAGPGIPEIKAYLNGVDTPNMFGAPTLFVKIIGSIGAVSAGLDLGKEGPLVHIGTCIASLLGQGGTEKYRLKWRWLRYMNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEYCSSGRCGLFGNGGLIMFDVSNVTVRYHMTDIIPVAIIGLIGGVLGSLYNYLLHKVLRVYSLINEKGKLAKILLSLTVSVFTSVCMYGLPFLVSCTKCDPSLRMSVCPTTGRTGNFKKFNCPDGYYNDLASLLFSTNDDAVRNIFSTNTPKEFHMFPLVIYFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGILMGSYTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKSVGDCFNKSIYEIILDLKGLPFLDANPEPWMRNITVGDLADVKPPLVSLRGIEKVSRIVEVLKNTTHNGFPVIDDNTLITVGQGSTRTMELHGLILRAHLVAVLKKKWFLREPRRTEEWEVREKFTWVELAERDTNFEQVAISKHEMEMYVDLHPFTNKTPYTVVEDMSAAKTMVLFRQVALRHLLVVPKYQGAGIYPVLGILTRQDLRAHNIQSVFPHLAKSKGREKQR*

Click here to download the sequence:
Link to NCBI Protein BLAST