Transcript Information: R_Transcript_71894.p1


Annotated TAIR IDAT5G65230.1
Annotated Gene Namemyb domain protein 53
Annotated Gene Symbol(s)AtMYB53, MYB53
Annotation TypeOrtholog
Chromosome Positionchr5:26068290-26069408 | Forward length=310
E-Value2.6E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1108290673212
Replicate 23.6113636716033
Replicate 32.8404354619229
Condition 2: 8 Hour
Replicate 117.433935842439
Replicate 222.897543005374
Replicate 320.329803894833
Condition 3: 24 Hour
Replicate 16.0608611081139
Replicate 24.3228307425532
Replicate 36.6538622248168


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71894.p1 GENE.R_Transcript_71894~~R_Transcript_71894.p1 ORF type:5prime_partial len:250 (+),score=37.99,Myb_DNA-binding|PF00249.27|2.6e-08,Myb_DNA-binding|PF00249.27|1.7e-14,Myb_DNA-bind_6|PF13921.2|4.6e-06,Myb_DNA-bind_6|PF13921.2|2.2e-06 R_Transcript_71894:3-752(+)
GTTGAGCATATCCAGAAACATGGTATTGGAAGTTGGAGTTCCCTTCCTAAACTTGCTGGGCTGAACAGATGCGGAAAGAGCTGCAGGTTAAGATGGACAAATTATTTGAGGCCAAACATAAAGCGAGGGCATTTCACCTCCGAAGAGGAGCAAACTATTCTTCATCTCCATTCGGTTCTTGGAAACAAGTGGGCGATTATTGCCTCGCGATTACCAGGGCGGACAGACAATGAAATCAAGAACTTTTGGAACACTCATTTGAAGAAGAAGCTGATAAAGATGGGGATAGATCCAGTGACCCATCAACCAAAAACTGATTTGTCTGTTAGCTTGTCGCAGCTGCTAGCATTGGCTAACCTGAAAGACCTGATTCTGCAGCACCCTTTTCCTCAAATTGTTCAATCTGCACAGGAGCTTCTCCAGCTTCATGCAGCTTCTACTTGTATGACTACCAATCCGTATTGTCAGGGCACAGGCACATACATGGACAGCCATGATTTATCAGATATAGATTATAAGACGTTACCATCTTTTAACCTGAAAGCAGCGTTGGTGAGCCCAAACCAGGAAGTGCTTGGAATTGATACATTTTCCCAACTACTCAGCCATCTTCCTTATAGTAGTAATTTGCAAGTGCCACAATTCCCTTTCAGTTTCCAAACAGCTCTGGAGAGTGATCAGATGGCAGGACAGGTGGTTGAGCAGCCGTCTTCTAGCTCTTCATGGATTAATCTTCCGCAACAACCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71894.p1 GENE.R_Transcript_71894~~R_Transcript_71894.p1 ORF type:5prime_partial len:250 (+),score=37.99,Myb_DNA-binding|PF00249.27|2.6e-08,Myb_DNA-binding|PF00249.27|1.7e-14,Myb_DNA-bind_6|PF13921.2|4.6e-06,Myb_DNA-bind_6|PF13921.2|2.2e-06 R_Transcript_71894:3-752(+)
VEHIQKHGIGSWSSLPKLAGLNRCGKSCRLRWTNYLRPNIKRGHFTSEEEQTILHLHSVLGNKWAIIASRLPGRTDNEIKNFWNTHLKKKLIKMGIDPVTHQPKTDLSVSLSQLLALANLKDLILQHPFPQIVQSAQELLQLHAASTCMTTNPYCQGTGTYMDSHDLSDIDYKTLPSFNLKAALVSPNQEVLGIDTFSQLLSHLPYSSNLQVPQFPFSFQTALESDQMAGQVVEQPSSSSSWINLPQQP*

Click here to download the sequence:
Link to NCBI Protein BLAST