Transcript Information: R_Transcript_71912.p1


Annotated TAIR IDAT3G03560.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:853153-856486 | Reverse length=521
E-Value4E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87560329303079
Replicate 20.54233986315161
Replicate 30.84526706996873
Condition 2: 8 Hour
Replicate 10.81318370673508
Replicate 20.74261231206889
Replicate 32.7461846326047
Condition 3: 24 Hour
Replicate 11.7790182722575
Replicate 20.7324624723808
Replicate 31.8576280730577


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71912.p1 GENE.R_Transcript_71912~~R_Transcript_71912.p1 ORF type:3prime_partial len:271 (+),score=52.19 R_Transcript_71912:515-1324(+)
ATGTCTGCTGATAAAAGTAGACCGCAGTTAAGCAGGCGTGATACTGGAAAATCTGCTTTATTGAATTTGAAAGGAGATGACAATTTAAACAATTCTGAGGAACAAAGGGCTATGGAACTTGTTTCACAAGCCAGGGCACAAGAACGCCAAATCTCCTTTCTCAAGTGGCAGATTAGCCAAGCTTATGTTAAGGAGATGCAGCTGTTGAATGAAAAATTTGCCCTAGAGAAGAAATATTCAGATCTACGGATGGCTATGGATGAGAAACAAAAGGAATCTATATCTTCAGCCTTGAAAGAAGTGGCCCACAGAAAAGGTGACATTGATGAAAACATAAGACTAACCAATGTTTTAAAGGATACAGAGGATGAAAGATATATTTTCATGACATCATTGCCCGGATTTTTGGCTGAGCATGGCATATGGCCCAACGTCGCAAATGCCTCTTCTATTTGTATGTCTTTGAAGGACCTATATGATCAATTGCAGTGGAAGATACAGGAGAAAACCAAGGAGTGGAGTTCTTTAACTGGGAATCATGCTATGGATCAGTACTATGGGGACAGCTCGCATCCCAGCGGCACAAATAGGGAAACAGCAATGTCTTTGTCTGATCATCATCATAAAGCTGAAGAGTACACAACAGCCCCCACTAGTATGTCACAGTATGGGGATGATGAACATAATAGGGATCCAGGGTATGGGCATGATGATTATAATAGGCATACAGGGCACTCCATAATTTATGGTGAGATACCCCCAACATTCGGCAGTCATAAGTTTATCTGGCTGGCTTTTTTCTATTCTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71912.p1 GENE.R_Transcript_71912~~R_Transcript_71912.p1 ORF type:3prime_partial len:271 (+),score=52.19 R_Transcript_71912:515-1324(+)
MSADKSRPQLSRRDTGKSALLNLKGDDNLNNSEEQRAMELVSQARAQERQISFLKWQISQAYVKEMQLLNEKFALEKKYSDLRMAMDEKQKESISSALKEVAHRKGDIDENIRLTNVLKDTEDERYIFMTSLPGFLAEHGIWPNVANASSICMSLKDLYDQLQWKIQEKTKEWSSLTGNHAMDQYYGDSSHPSGTNRETAMSLSDHHHKAEEYTTAPTSMSQYGDDEHNRDPGYGHDDYNRHTGHSIIYGEIPPTFGSHKFIWLAFFYSG

Click here to download the sequence:
Link to NCBI Protein BLAST