Transcript Information: R_Transcript_71913.p1


Annotated TAIR IDAT3G03560.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:853153-856486 | Reverse length=521
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1474071711434
Replicate 21.4409225775891
Replicate 33.5932137405729
Condition 2: 8 Hour
Replicate 10.84020124818979
Replicate 20.98650949299348
Replicate 31.0677418011992
Condition 3: 24 Hour
Replicate 11.3504592486885
Replicate 22.2703942975594
Replicate 30.64375602020286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71913.p1 GENE.R_Transcript_71913~~R_Transcript_71913.p1 ORF type:3prime_partial len:204 (+),score=40.12 R_Transcript_71913:515-1123(+)
ATGTCTGCTGATAAAAGTAGACCGCAGTTAAGCAGGCGTGATACTGGAAAATCTGCTTTATTGAATTTGAAAGGAGATGACAATTTAAACAATTCTGAGGAACAAAGGGCTATGGAACTTGTTTCACAAGCCAGGGCACAAGAACGCCAAATCTCCTTTCTCAAGTGGCAGATTAGCCAAGCTTATGTTAAGGAGATGCAGCTGTTGAATGAAAAATTTGCCCTAGAGAAGAAATATTCAGATCTACGGATGGCTATGGATGAGAAACAAAAGGAATCTATATCTTCAGCCTTGAAAGAAGTGGCCCACAGAAAAGGTGACATTGATGAAAACATAAGACTAACCAATGTTTTAAAGTTGGATTCACTCGAACATTGGGAGCCAGCAACTTTTATTTTGAGACAGTCAGGATATCAAGTTAAGATCAACAAGACCGAAACTGTCCATATTGCTGAGAAATTCTCGGACAACTTCTCGATAAAAGTTCCTGTTGGGTTTTCAATACAGTTTGTCTTGACATGTTCTGATGGAACTTCCCATCCTTTTAGCACATACGATGTTCGAATGCGTGATACTCTTGTGCTGACCATGAGAATGTTCCAAAGTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71913.p1 GENE.R_Transcript_71913~~R_Transcript_71913.p1 ORF type:3prime_partial len:204 (+),score=40.12 R_Transcript_71913:515-1123(+)
MSADKSRPQLSRRDTGKSALLNLKGDDNLNNSEEQRAMELVSQARAQERQISFLKWQISQAYVKEMQLLNEKFALEKKYSDLRMAMDEKQKESISSALKEVAHRKGDIDENIRLTNVLKLDSLEHWEPATFILRQSGYQVKINKTETVHIAEKFSDNFSIKVPVGFSIQFVLTCSDGTSHPFSTYDVRMRDTLVLTMRMFQSK

Click here to download the sequence:
Link to NCBI Protein BLAST