Transcript Information: R_Transcript_71916.p1


Annotated TAIR IDAT3G03560.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 157 Blast hits to 146 proteins in 38 species: Archae - 3; Bacteria - 14; Metazoa - 8; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:853153-856486 | Reverse length=521
E-Value9.7E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5555030639019
Replicate 27.1782223645464
Replicate 37.5376871577083
Condition 2: 8 Hour
Replicate 16.0168257883188
Replicate 28.3614408594177
Replicate 38.8818778463005
Condition 3: 24 Hour
Replicate 17.3092164036921
Replicate 26.9747399910373
Replicate 39.7746373494905


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_71916.p1 GENE.R_Transcript_71916~~R_Transcript_71916.p1 ORF type:complete len:468 (+),score=87.33,SCAB-IgPH|PF16709.1|1.8e+03,SCAB-IgPH|PF16709.1|3.7e-06 R_Transcript_71916:515-1918(+)
ATGTCTGCTGATAAAAGTAGACCGCAGTTAAGCAGGCGTGATACTGGAAAATCTGCTTTATTGAATTTGAAAGGAGATGACAATTTAAACAATTCTGAGGAACAAAGGGCTATGGAACTTGTTTCACAAGCCAGGGCACAAGAACGCCAAATCTCCTTTCTCAAGTGGCAGATTAGCCAAGCTTATGTTAAGGAGATGCAGCTGTTGAATGAAAAATTTGCCCTAGAGAAGAAATATTCAGATCTACGGATGGCTATGGATGAGAAACAAAAGGAATCTATATCTTCAGCCTTGAAAGAAGTGGCCCACAGAAAAGGTGACATTGATGAAAACATAAGACTAACCAATGTTTTAAAGGATACAGAGGATGAAAGATATATTTTCATGACATCATTGCCCGGATTTTTGGCTGAGCATGGCATATGGCCCAACGTCGCAAATGCCTCTTCTATTTGTATGTCTTTGAAGGACCTATATGATCAATTGCAGTGGAAGATACAGGAGAAAACCAAGGAGTGGAGTTCTTTAACTGGGAATCATGCTATGGATCAGTACTATGGGGACAGCTCGCATCCCAGCGGCACAAATAGGGAAACAGCAATGTCTTTGTCTGATCATCATCATAAAGCTGAAGAGCACACAACAGCCCCCAATAGTATGTCACAGTATGGGCATGATGAGCATAATAGGGATCCAGGGTATGGGCATGATGATTATAATAGGCATACAGGGCACTCCATAATTTATGACGAGGGCCCTGGAATAGAAGGCTTTCAAATTATTGGTGATGCTAAACCAGGAAACAAGCTTCTTGGGTGTGGTTACCCTGTACGAGGCACTTCTCTCTGCATGTTTCAGTGGGTTCGTCATCTCCCAGATGGCACCAGACACTACATTGAGGGTGCTACCAACCCAGATTATGTAGTAACAGCTGATGATGTTGATAAATATATTGCTGTTGAGTGCATACCAATGGACGAGAGTGGCCGTCAGGGGGATATAGTGAGACTCATTGCCAATGATCAGAGTAAAATAACTTGTGACCCAGAAATGCAAACAGAGATTGACACATATATCTCTAATGGTCAGGCGGCTTTTAACGTTTCGGTGCTGTTGGATTCACTCGAACATTGGGAGCCAGCAACTTTTATTTTGAGACAGTCAGGATATCAAGTTAAGATCAACAAGACCGAAACTGTCCATATTGCTGAGAAATTCTCGGACAACTTCTCGATAAAAGTTCCTGTTGGGTTTTCAATACAGTTTGTCTTGACATGTTCTGATGGAACTTCCCATCCTTTTAGCACATACGATGTTCGAATGCGTGATACTCTTGTGCTGACCATGAGAATGTTCCAAAGTAAGGCCCAGGATGACAGGAGAAAAGGAAAGCGACACTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_71916.p1 GENE.R_Transcript_71916~~R_Transcript_71916.p1 ORF type:complete len:468 (+),score=87.33,SCAB-IgPH|PF16709.1|1.8e+03,SCAB-IgPH|PF16709.1|3.7e-06 R_Transcript_71916:515-1918(+)
MSADKSRPQLSRRDTGKSALLNLKGDDNLNNSEEQRAMELVSQARAQERQISFLKWQISQAYVKEMQLLNEKFALEKKYSDLRMAMDEKQKESISSALKEVAHRKGDIDENIRLTNVLKDTEDERYIFMTSLPGFLAEHGIWPNVANASSICMSLKDLYDQLQWKIQEKTKEWSSLTGNHAMDQYYGDSSHPSGTNRETAMSLSDHHHKAEEHTTAPNSMSQYGHDEHNRDPGYGHDDYNRHTGHSIIYDEGPGIEGFQIIGDAKPGNKLLGCGYPVRGTSLCMFQWVRHLPDGTRHYIEGATNPDYVVTADDVDKYIAVECIPMDESGRQGDIVRLIANDQSKITCDPEMQTEIDTYISNGQAAFNVSVLLDSLEHWEPATFILRQSGYQVKINKTETVHIAEKFSDNFSIKVPVGFSIQFVLTCSDGTSHPFSTYDVRMRDTLVLTMRMFQSKAQDDRRKGKRHS*

Click here to download the sequence:
Link to NCBI Protein BLAST