Transcript Information: R_Transcript_72029.p1


Annotated TAIR IDAT5G60410.2
Annotated Gene NameDNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
Annotated Gene Symbol(s)ATSIZ1, SIZ1
Annotation TypeHomolog
Chromosome Positionchr5:24295226-24300792 | Forward length=885
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8265243447242
Replicate 21.7707723242661
Replicate 32.6494539870249
Condition 2: 8 Hour
Replicate 12.5075885789348
Replicate 23.2328985794485
Replicate 34.2645350252716
Condition 3: 24 Hour
Replicate 14.2596413410439
Replicate 22.7635505115904
Replicate 34.8785847796096


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72029.p1 GENE.R_Transcript_72029~~R_Transcript_72029.p1 ORF type:complete len:830 (+),score=180.37,zf-MIZ|PF02891.16|1.2e-18,PHD|PF00628.25|3.4e-05,PHD|PF00628.25|6.3 R_Transcript_72029:340-2829(+)
ATGGAGATGGATTCTGATGTTATCAATGCTTGTAAGAACAAAGTGAAGCAGTTCCGGATCAAAGAGCTTAAGGATGTACTGACTTATGTAGGCCTTTCAAAGCAAGGGAAGAAGCAGGATCTTACGGACAGAGTTTTGGCTTTGCTTTATGATGAAGGCACTCCTGGTGTGTTCAACAATAACGTAAATGGGAAGGAAGAACTTGTTGAATTTATTGATGATGCTTACAGGAAGATGCATGAAATGGGTACAGCCGACTCAAATTCAAAGAAGCAAAATGGCGCAAATTGCAGCAGAAGCCAGTCCAAGGAGGTTGTTGAAGAACCGTACCACTTGGAAAGACAAATTAGATGTCCTTGTGGTAGCAACGTCCCCAATGATGGCGTGCTGATTCAGTGCCTGGACCCAGATTGTAATGTATGGCAACACCGTTGTTGTGTGATTATCCCTGAGAAGCCTATGGAGGCGATTTCTGTGCCATTTCAGTTTCTTTGTGAAATCTGTCGAGCGAAACGTGCTGACCCCTTTTGGGCAACTATGGCGCATCCATTGTATCCTGTCAAGTTAAGTTCTTCATCAGTTCCTCTTGATGGTACCAACCCCATTCAGACGGTGGAGAAAACCTTTAAATTAACAAGGGCAGATAGGGATTTGTTGCAGAAGGAGGATTATGATCTACAGGCCTGGTGCATGCTTTTGAATGATAGCGTTCCATTTAGGTTGCAATGGCCGCGATATGCTGATCTTCAGGTTAACGGTATTCCAGTTCGAACTGTAAATAGACCAGGTTCACAGTTGTTAGGAGCTAATGGACGCGATGATGGTGCAAAAATGACATTGTACATCGCAGAAGGAACGAACAAAATTTCCTTATCAGGGTCTGATGCTCGTATTTTCTGTCTTGGAGTCAGACTTGTGAGAAGGCGAACACTTCAACAGGTACTAGGTATGATTCCTAAGGAGCCAGATGGTGAGTCTTTTGAGTATGCCCTTGCTCGAGTCCAGCGATGCATTGGTGGTGGAATGGCAACAGATAATAATGACAGTGATAGTGATTTAGAGGTCATTGCTGATTCAATCACGGTTAATCTTCGCTGTCCTATGAGTGGCTCTAGAATGAAGACTGCTGGAAGATTCAGACCTTGCGCACATATGGGCTGCTTTGATCTTGGAACTTTTGTGGAACTCAATGAACGCTCCAAGAAGTGGCAATGCCCCATCTGTCTCAAGAACTACTCTCTCGAAGATCTTATTATTGACCCGTTTTTCAATCGTATTCTAAACATGATGCAAAATTGTGAAGAGGAGATAAATGAGATTGACATGAAGTCTGATGGTACTTGGCGAGCCAAAAAAGCTCGTGAAGTTGGGGATCTTGCACAGTGGCACCGCCCTGATGGTTCTGTTGAAGCCCTTTTCTTATCAGAAATTAGGCAAGGAGATGTATTGGAATGCAGGAATTCACAACTAGGTATAGAGAATGACAGTGGTGGTTGCCATGCTGATGGCCATCAGGGTGTAGGCCACTCATTCATGAATCAAGAGGGCAATGAAGTTGAATATTGTGACCAGAAGAATATCATAACCATGAGCAGCACTTCCACAGGATGTGATAATGATGATGGGGACCCAAGTATTAACCAAGATGGTGGTGATGAGTTTGGTAATTCTAATAGCAATGAGAATGAAGTCAGTTCAGGTGGTCGAGGCGCTAGTCTTTCGGCAGCACATGCTGATGTTATTGTTCTTAGTGATTCAGAAGATGATGATGTTTGTCTAGTTTGTCCGGAAACTGTTTCTGTAGATGGAAATTCACTTTCTGCTCCTGCAAAAATTATTGACTCTTATCCTGCGCTTGTTTCTGGTGATCGCTCGTGTCTTTTCAATGGGAATGCTGATGCCTTTTTGAAGTCTCAGCCGTCTGTTCCTTCTAATCCGCAAGGAGATCCTGGAATGGATTTCTTTGGTACTGGCGTCATGGTTGATGAGCATAATTCAGCCTCCTGTTCTCAATCTGTAAATCAGTTGTTGACCTCAGAGTCCTCTATGGATCGTGTTCTTAATGTTATGGATTCACATGATCCAACTAATAGCTCGTTTGTCCATCCGTTGGCATCTGTTAGTGGTGACATCTCGTTAGAAGTTCTCCTTCCCTCTCCATCTGTTCCCAACCATGAACTTTCAATTTTGAGCAGTATTCCTGGTGAGGACTGGATTTCTCTGAAAACAGGCGGAAATGGAAATTTGGCTGACAGTAGCAATGTTGCAGTTCATCACGAGTCTGCGAATGAAAATGTGATGGATTTGCCAAACCAACCTACATCTAAAGAAGATACTGTGGTCCAGGAAACTTCAGGTGAATCTGGTTCTGGATCTGATCCCACAGTGAATAGGCCAAGATCTGATGGTCCATTCTCTTTTCCTCGCCACCGAAGGACTATGAGAAAACGTGCACATGAAGCAGCGTTTCGAGACCTTGTATCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72029.p1 GENE.R_Transcript_72029~~R_Transcript_72029.p1 ORF type:complete len:830 (+),score=180.37,zf-MIZ|PF02891.16|1.2e-18,PHD|PF00628.25|3.4e-05,PHD|PF00628.25|6.3 R_Transcript_72029:340-2829(+)
MEMDSDVINACKNKVKQFRIKELKDVLTYVGLSKQGKKQDLTDRVLALLYDEGTPGVFNNNVNGKEELVEFIDDAYRKMHEMGTADSNSKKQNGANCSRSQSKEVVEEPYHLERQIRCPCGSNVPNDGVLIQCLDPDCNVWQHRCCVIIPEKPMEAISVPFQFLCEICRAKRADPFWATMAHPLYPVKLSSSSVPLDGTNPIQTVEKTFKLTRADRDLLQKEDYDLQAWCMLLNDSVPFRLQWPRYADLQVNGIPVRTVNRPGSQLLGANGRDDGAKMTLYIAEGTNKISLSGSDARIFCLGVRLVRRRTLQQVLGMIPKEPDGESFEYALARVQRCIGGGMATDNNDSDSDLEVIADSITVNLRCPMSGSRMKTAGRFRPCAHMGCFDLGTFVELNERSKKWQCPICLKNYSLEDLIIDPFFNRILNMMQNCEEEINEIDMKSDGTWRAKKAREVGDLAQWHRPDGSVEALFLSEIRQGDVLECRNSQLGIENDSGGCHADGHQGVGHSFMNQEGNEVEYCDQKNIITMSSTSTGCDNDDGDPSINQDGGDEFGNSNSNENEVSSGGRGASLSAAHADVIVLSDSEDDDVCLVCPETVSVDGNSLSAPAKIIDSYPALVSGDRSCLFNGNADAFLKSQPSVPSNPQGDPGMDFFGTGVMVDEHNSASCSQSVNQLLTSESSMDRVLNVMDSHDPTNSSFVHPLASVSGDISLEVLLPSPSVPNHELSILSSIPGEDWISLKTGGNGNLADSSNVAVHHESANENVMDLPNQPTSKEDTVVQETSGESGSGSDPTVNRPRSDGPFSFPRHRRTMRKRAHEAAFRDLVSK*

Click here to download the sequence:
Link to NCBI Protein BLAST