Transcript Information: R_Transcript_72126.p1


Annotated TAIR IDAT1G71490.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26933326-26935371 | Reverse length=681
E-Value3.6E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1546914559844
Replicate 20.62675523630741
Replicate 31.4918906439828
Condition 2: 8 Hour
Replicate 11.495066380768
Replicate 20.94055269616927
Replicate 32.3397598493036
Condition 3: 24 Hour
Replicate 11.7444195451173
Replicate 21.5860633937593
Replicate 32.1085848477201


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72126.p1 GENE.R_Transcript_72126~~R_Transcript_72126.p1 ORF type:complete len:737 (+),score=116.61,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|4.2e-10,PPR_2|PF13041.2|0.93,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|7.1e-06,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|11,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|8.7e-06,PPR|PF01535.16|0.3,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.078,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|0.0027,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.063,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|7.5e+03,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|92,PPR_1|PF12854.3|43,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.00033,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|4.2e+03,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.0063,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|2.8e-05,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|24,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|7.1e+03 R_Transcript_72126:237-2447(+)
ATGCCGTATCTTTCTTCGTGGTCTTATCCAAAAGGGTTGTTTATATCTCGGATTGAGAAGTGTGTTCCTAGGAAGTGGAAGCAAGATATCAAGCAAATAGGTATAACACATAATCAATTGGTCAGATTAGATACTTCTGGCACAACATCAAGAGCATCTGCAGTCAATGATGAATTGATGGTATATCCTTTACTAACATCTCTGAAGGAATTCATCGCCCAAGGTGATCTCTACAAAGCATTTAGGGTCTTCTCTTCCATCCAACTTCATGTTTCTTCTTCTGCGTGCTATGATCTAATTGTGGACTCTTTTTCCTCTCTACTGATAGCTTGTTGTAATCACAAATCACTTTCACAGGGTAGGCAGTTCCATGCTCAGATCATAAATTTGGGTTTAGATCAACACTGTCTTTTGTTGCCGAAGCTTGTCACTTTATACTCTGCTTCTAATCTGCTTCCCCAGGCTCATTATATAGCTAAGAATTCTAGTTTCTTGCATCCTCTGGTTTGGAATATCCTTATATCAGCTTACGTAAGAGATGGGCATTGCAAGGAGGCTTTGTTCACATACAACCAAATGTTGAGTATTGGGATTAGACCAGATCACTTCACATACCCATCTGTGCTTAAGGCATGTGGTGAACAAGCTGATCTTTCTTTTGGTAGGGAGATCCATAAATCCATTTCTCTTAGCAACTGTGGTGGTTCTCTATGTGTTCAAAATGCATTAATTTTAATGTATAGTAAATGTGGAGAACTCAAAGTTGCTCGTGAATTGTTTAACAACTTATCCAAGAGGGATAAATATTCATGGAATTCCATGATTTCTGGGTATGCTTCTAAGGGTATGTGGGAGGATGCATTTAAGCTGTTTGAACAAATGCAACTTGAGGGAGTTGAAATGAATATCATAACTTGGAACACAATTATTGGTGGCTGCTTGCAGACTGGAAATTATGAGAGTGCACTTCATTTGCTTTCTCAAATGAGGGCATGTGCCATCAACTTGGATGCTGTTTCAATGATCAGTGGTTTGGGTGCTTGCTCTCACCTGGGAGTTGTAAACCTGGGGAAAGAGATTCATGCTTATTCTGTCCGTGGTGGTTGTGATAAATTTCATAATGTTCAAAATGCATTAATAACTATGTATGCTAGGTGTCAGGACCATAAGCATGCATATATTGTGTTCCGGCAGATGGAAGATAAGGATATAATTTCCTGGAATTCAATAATTTCAGGTTATGCTCATTCTAATAAATCTGAGGAAGCGTCTTTCTTGTTTAGGGAAATGTTGTTTTGTGGCTTTGAACCAAATTATGTGACCATTGCAAGTATCCTTCCTCTTTGTGCCCGAGTAGCTAATCTCCAACATGGTAAAGAACTCCACTGCTACATTATCAAGCATCACGAGTTCACTGAGTATTTACGATTGTCAAATGCTCTTGTCGATATGTATGCAAGAGCAGGCAAAATTTCCGAGGCCAAAAGAGTGTTTGACTCTTTAAGCAAGAAGGATGTTGTCACATATACCTCTCTAATAACAGGATATGGCATTCTAGGAGAGGGAGAAGTCGCATTAAAGTTATTCGAGGAGATGAAGAGGTCTGGAATCAAACCCGACCATATTACTATGGTTGCAGTTCTAGCGGCTTCTAGCCACTCCGGTCTTGTTAACCAAGGGCAATTGTTGTTTGAAAAATTGTGGAGTGTGTATGGCATAAGGCCTCGTGTCGAGCACTATGCATGCATGGTTGACCTTTTTGGTAGGGCAGGATTACTTAAGAAAGCTGAAAAGATGATGAGAATGATGCCTTATCAACCAACTCCTGATATGTGGGCCACTCTGATAGGAGCTTGTCACATTCATCGGAACATGGATTTAGGAGAGTTGGCAGCAGAGAAATTGTTGGCAATGAGGCCCAAAAATTCACGATACTATGTGTTGATTGCTAATATGTATGCTGCTGCTGGCTGCTGGAATAAGCTGGCAACAGTCAGGACATTAATGAGGGACTTGGGAGTAATGAAGCCTCCAGGCTGTGCTTGGGTTGACATAGGGTATGGTTTTGAGCCCTTTATGGTAGCAGATGCATCCACTGAGTTGTCAAATGAGATTTACCCCTTACTGGATGGATTGAGTGCGCAAATGAAGGATGTTGGATATTTTGCCGATCATGTCATTATAGATTGTGATGAGGCTTGTCAGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72126.p1 GENE.R_Transcript_72126~~R_Transcript_72126.p1 ORF type:complete len:737 (+),score=116.61,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|4.2e-10,PPR_2|PF13041.2|0.93,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|7.1e-06,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|11,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|8.7e-06,PPR|PF01535.16|0.3,PPR|PF01535.16|4.2e-10,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|1.3e+04,PPR|PF01535.16|0.078,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|0.0027,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.063,PPR|PF01535.16|4.7e+03,PPR|PF01535.16|7.5e+03,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|92,PPR_1|PF12854.3|43,PPR_1|PF12854.3|2.5e-07,PPR_1|PF12854.3|0.00033,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|4.2e+03,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|5.3e-05,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.0063,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|2.8e-05,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|24,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|7.1e+03 R_Transcript_72126:237-2447(+)
MPYLSSWSYPKGLFISRIEKCVPRKWKQDIKQIGITHNQLVRLDTSGTTSRASAVNDELMVYPLLTSLKEFIAQGDLYKAFRVFSSIQLHVSSSACYDLIVDSFSSLLIACCNHKSLSQGRQFHAQIINLGLDQHCLLLPKLVTLYSASNLLPQAHYIAKNSSFLHPLVWNILISAYVRDGHCKEALFTYNQMLSIGIRPDHFTYPSVLKACGEQADLSFGREIHKSISLSNCGGSLCVQNALILMYSKCGELKVARELFNNLSKRDKYSWNSMISGYASKGMWEDAFKLFEQMQLEGVEMNIITWNTIIGGCLQTGNYESALHLLSQMRACAINLDAVSMISGLGACSHLGVVNLGKEIHAYSVRGGCDKFHNVQNALITMYARCQDHKHAYIVFRQMEDKDIISWNSIISGYAHSNKSEEASFLFREMLFCGFEPNYVTIASILPLCARVANLQHGKELHCYIIKHHEFTEYLRLSNALVDMYARAGKISEAKRVFDSLSKKDVVTYTSLITGYGILGEGEVALKLFEEMKRSGIKPDHITMVAVLAASSHSGLVNQGQLLFEKLWSVYGIRPRVEHYACMVDLFGRAGLLKKAEKMMRMMPYQPTPDMWATLIGACHIHRNMDLGELAAEKLLAMRPKNSRYYVLIANMYAAAGCWNKLATVRTLMRDLGVMKPPGCAWVDIGYGFEPFMVADASTELSNEIYPLLDGLSAQMKDVGYFADHVIIDCDEACQE*

Click here to download the sequence:
Link to NCBI Protein BLAST