Transcript Information: R_Transcript_72167.p1


Annotated TAIR IDAT3G53540.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in 206 species: Archae - 2; Bacteria - 409; Metazoa - 304; Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19846805-19850670 | Reverse length=924
E-Value4.7E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8172762932041
Replicate 23.1169765566463
Replicate 34.1326588446667
Condition 2: 8 Hour
Replicate 14.0136623985691
Replicate 24.1955469021606
Replicate 35.2770661803599
Condition 3: 24 Hour
Replicate 14.6388971305464
Replicate 23.6379808479303
Replicate 35.2801266976639


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_72167.p1 GENE.R_Transcript_72167~~R_Transcript_72167.p1 ORF type:complete len:970 (+),score=210.08,DUF4378|PF14309.2|1.8e-23,DUF3741|PF12552.4|2.2e-18,DUF3741|PF12552.4|6.2e+03,VARLMGL|PF14383.2|7.4e-07 R_Transcript_72167:606-3515(+)
ATGGAGAAATCTCGGCGAAGAAGGTCGCATGCTAGGGTTTCTTCACCGGTCAAGGTCACAACCCCCTCCCACCTGAAAGAAACTGGAAAACAAACTAGCTCATCACAATCGCGGTTCGATTCCAGTTCTTCTAGTAGTGTTGCAACCGTAGAGGTTGATCGGCTTACACTTGACAGGGGAAGGAATTCAACGTTGCCAACTGGCACCCCAATGAAGAAGTTATTGGCAGATGAGATATCAAAGGATAGTGAATCCAAAAGGCGATCACCTAGCATTATTGCTAGACTGATGGGTCTTGATGGGTTTCCTACTCAGCATAGTAGTAACAAACAACGTAAGAGACTTGGTGAAGAATATCAAGGGAATGTTGTATTTCGCAAGACTGGTGGACTTAACAACTGTCGAAAGACTGCAAAGTGGCAGCAAGAATTTAAAGATGTTTATGAAGTTGCTGAGAGTTTGAACACAGAATCTTGGGGCAACACATCATCTTCAGCTTCCAATTTGAATCTCAGTGACGATGAGATTGCCTTCATAAGGCAAAAATTCATGGATATGAAACGCTTTTCTACTGATGAAAAGCTTCATCATTCAAAGGAGTTCCATGATGCACGTGAGGTGCTTTATTCCAACAAAGATATTCTTCTGAAGTTTCTCCATGAATCCGATCCACTGTTCTCGAAGCATCTTCATGATTTGCGTCATGCTCATGAATCTCATGGAAGGCATGGTCTAAGGATGAAATCCAGAAACACTTTGAAGTGCAATATTGATGCCATAGGGTGGCAATCCGCGGGTGAAGCTTCTCAGAAGATAGATATTAGCCATTCTCATAAATATTCTGATAGCGGTCATCCTCATAAATTAAATTCCCGAGCAGAAGGGAAGGAAGATGCTGCTTCGATCCCCACAAGGATTGTGGTCTTGAAACCAAATCTTGGTAAGATGCAAAACACTGCTGCATCTGTTTTTTCTCCAAGTCCTTCTTGTGATCCGGGCTCTGATCTTGATTCGTGTGATGAGTGCTCACATGTACTGCATGCTGGATATGAAATGAGGAGTAAGATAAACCCATATGACGATTTTGATGTTTATGAGTGTAAGTCCCGAGAATCTGGAGACCTAGCTAGGAAATTAACTCGAAGGATGAGAAATAAATTAGGTGTAGACACCTTCAGTGTTTCTTCATCTTGTCGTAAAGGATACTCAGCTGATGAAAGTTCACATGATTCATCGGAGAATGATTCTTCCTATGAATCAGAAGTTACAATTGTAAGTTCCCAGACTTCATTTAAAAAGAGCTTCCGTAACAAACCTTCAACTTCACAATGCACTGGGTCATCTGTCAATAGGGAGGCCAAGCGCAGACTCTCTGAGAGATGGAAAATGATTCACAGGTCTCAAGAGGTTGGGGCATCAGGTAAAGGAAGCACACTGGGTGAAATGCTTGCTGTCCCTGAGGTGGACATAAGACCACGGAGTCCTGATTCTGTAGTTGCGCCAGATGAGTTCTTACAAAGATTTGGGGGCAATGATGGAATTTCACAATTGAGTGTTCCCATGGGTATTAGCAGTAGAGATGGCTGGAAGGATGAATGTATTCGGAGCTTGTCAAACTCTAGGTCCCTTCAAGCTTCTTATCATCTTGGAAGTCCTAAATCCTGCAGGAGGCTTGAAGCAAACATTGCACAAAGGTGTCTGGTCGGAAAAGAAAGAACTGATCATGGTGCAGCAATCAGGACAGATTCTAAGGGAAAAAAAGGGTCATTTTCGGAAAGTAAGAAATCCTGTAACAAAAAATTCCAGTCTTCTCATCATGCAAGTGTGGAAATAATACAAGATACACATGAAGCCCAGTTCAGCAAGGGCATGATGGCTAAAAGCCCTGTTGGAAGGGATTCATCTGACGTAAAGGATGTTATATTAGAGATGTCATCTTGCAGACATGGCACTAATTTATCCTGCAATACAGTGATGGACAAGGAGCAAATAAAGGACTGCGATTCTTTGAATTACCCTGATGAACAGCTTCTTGCGTCAGGGTTACCCTGCATTACCCCAGATGATTCCTCGCAATCCGACCTGCCAGTGCCATCTGGACTAGAGGAAACTTCAACAAGCTGTGATGCAAGCGGGTCATCTTGTTTGCAATGTGTGGCATCTCAACCAGCATCTCCTGTGAGCAGCAAGGAGACTGAGCAACCTAGTCCTGTTTCAGTACTGGAAGCTCCTTTCACTGAAGAACTTTCATCTGGTTCAGAGTGTTTTGAGCGAGTTAGTGCTGAGCATCATGGGTTAAGAATGCAACTTCAGCTATTGAGACTGGAATCTCAAGCATATAACGAAGGCTCTATGATTGTCTCCAGTGATGACGATGTGGAATCATCGACTGATCATCATGATTGCAGGGGATATCTTGGAGTTGGGGAGAGCTGGGAATCATCTTATTTGGTAGATGTACTGGCTAGAGCAGGAATTGACGAAACAAATCCTGATTTGTTTCTTGGGACTTGGCACTCTCCAGATTGTCCTGTTGCCCCTTGGGTTTTCGAAACTCTTGAGAAGAAATATCTTGCATGGGAATCATGTTTGACGTCAGAGAGAAAGCTGCTGTTTGATAGTATAAATTCTGCCATCATAGAAATTTCCAGGAATTTTGTAGATCTGCATTGGTGGATGAAGCCACTTCCAATTGCTGGGAGGCCTCAATGGCGGAAGGATTTGTGGCTCAAAACTGAGCTGCAGAATTCACTGAAGAAACATGAAACGAAAGTGACCAATATTGGGATGGACACATTGATACTCGACAACATGTCGTGGCCGGAGCTTGCAGAGCATATTGACACCATTGGTAGGGACATTGAGGGATTGGTGTTAGATGAGCTACTAGCAGAAGTACTCCCTGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_72167.p1 GENE.R_Transcript_72167~~R_Transcript_72167.p1 ORF type:complete len:970 (+),score=210.08,DUF4378|PF14309.2|1.8e-23,DUF3741|PF12552.4|2.2e-18,DUF3741|PF12552.4|6.2e+03,VARLMGL|PF14383.2|7.4e-07 R_Transcript_72167:606-3515(+)
MEKSRRRRSHARVSSPVKVTTPSHLKETGKQTSSSQSRFDSSSSSSVATVEVDRLTLDRGRNSTLPTGTPMKKLLADEISKDSESKRRSPSIIARLMGLDGFPTQHSSNKQRKRLGEEYQGNVVFRKTGGLNNCRKTAKWQQEFKDVYEVAESLNTESWGNTSSSASNLNLSDDEIAFIRQKFMDMKRFSTDEKLHHSKEFHDAREVLYSNKDILLKFLHESDPLFSKHLHDLRHAHESHGRHGLRMKSRNTLKCNIDAIGWQSAGEASQKIDISHSHKYSDSGHPHKLNSRAEGKEDAASIPTRIVVLKPNLGKMQNTAASVFSPSPSCDPGSDLDSCDECSHVLHAGYEMRSKINPYDDFDVYECKSRESGDLARKLTRRMRNKLGVDTFSVSSSCRKGYSADESSHDSSENDSSYESEVTIVSSQTSFKKSFRNKPSTSQCTGSSVNREAKRRLSERWKMIHRSQEVGASGKGSTLGEMLAVPEVDIRPRSPDSVVAPDEFLQRFGGNDGISQLSVPMGISSRDGWKDECIRSLSNSRSLQASYHLGSPKSCRRLEANIAQRCLVGKERTDHGAAIRTDSKGKKGSFSESKKSCNKKFQSSHHASVEIIQDTHEAQFSKGMMAKSPVGRDSSDVKDVILEMSSCRHGTNLSCNTVMDKEQIKDCDSLNYPDEQLLASGLPCITPDDSSQSDLPVPSGLEETSTSCDASGSSCLQCVASQPASPVSSKETEQPSPVSVLEAPFTEELSSGSECFERVSAEHHGLRMQLQLLRLESQAYNEGSMIVSSDDDVESSTDHHDCRGYLGVGESWESSYLVDVLARAGIDETNPDLFLGTWHSPDCPVAPWVFETLEKKYLAWESCLTSERKLLFDSINSAIIEISRNFVDLHWWMKPLPIAGRPQWRKDLWLKTELQNSLKKHETKVTNIGMDTLILDNMSWPELAEHIDTIGRDIEGLVLDELLAEVLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST